New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1886259	54 (0.940)	5 (0.100)	5/310	NT	9.2%	coding (926/1488 nt)	rmuC	DNA recombination limiting inversions protein
	?	AE015451	= 1886243	50 (0.960)					coding (910/1488 nt)	rmuC	DNA recombination limiting inversions protein

CAGGCCTTGAAGGGCCAGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGAT  >  AE015451/1886024‑1886457                                                                                                                                                                                                                            |                                                                                                                                                                                                                       cAGGCCTTGAAGGGCCAGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACG                                                                                                                                                                                                         >  1:827457‑M1/1‑235 (MQ=255)        tGAAGGGCCAGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGtt                                                                                                                                                                                                 <  1:585372/236‑1 (MQ=255)        tGAAGGGCCAGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGtt                                                                                                                                                                                                 >  1:562106/1‑236 (MQ=255)                 aGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCTTACCAGCAGt                                                                                                                                                                                                                        >  1:227201/1‑204 (MQ=255)                               aaCTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACATGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTgcgc                                                                                                                                                                                             <  1:665285/217‑1 (MQ=255)                                    gggTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTtcgttgccggcaacgaactgctggtacgccgtgaggctgaccctgtctct                                                                                                                                                                      <  1:378457‑M2/235‑51 (MQ=255)                                        gAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAg                                                                                                                                                                 <  1:886397/236‑1 (MQ=255)                                            ttATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTtcgttgccggcaa                                                                                                                                                                                                           <  2:810431‑M2/190‑14 (MQ=255)                                              aTCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAacgacg                                                                                                                                                                                                      >  1:788717/1‑193 (MQ=255)                                              aTCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGc                                                                                                                                                                        <  1:285234/223‑1 (MQ=255)                                                      aCGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGaa                                                                                                                                                                                                    >  2:4325/1‑187 (MQ=255)                                                         tgtgCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTgcgc                                                                                                                                                                   <  2:823308/217‑1 (MQ=255)                                                          gtgCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAagca                                                                                                                                                                                      <  1:892257/197‑1 (MQ=255)                                                           tgCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGAactgctggtacg                                                                                                                                                                                            <  2:378454‑M1/190‑13 (MQ=255)                                                            gCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCg                                                                                                                                              >  1:556994/1‑235 (MQ=255)                                                             atgGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGG                                                                                                                                                                                                              <  1:92596‑M1/169‑1 (MQ=255)                                                                    aggccGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTtcgttgccggcaacgaactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggc                                                                                                                                             >  1:357908‑M2/3‑153 (MQ=255)                                                                       ccGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAagca                                                                                                                                                                                      >  2:892254/1‑184 (MQ=255)                                                                         ggCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGa                                                                                                                                             <  1:843010/223‑1 (MQ=255)                                                                             tGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGAactgctggtacgccgtgaggctgaccttggcgtccacccccacctgca                                                                                                                                                        >  2:357905‑M1/1‑160 (MQ=255)                                                                               gAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  1:648216/235‑1 (MQ=255)                                                                                aaaaGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGTCAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTTGAGCAAGGACCACAgccgcc                                                                                                                           <  2:562103/234‑1 (MQ=255)                                                                                 aaaGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  2:450656/233‑1 (MQ=255)                                                                                    gtgccGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACG                                                                                                                                                                                                         <  2:734074‑M1/150‑1 (MQ=255)                                                                                        cgcgAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGcc                                                                                                                  <  1:950471/235‑1 (MQ=255)                                                                                        cgcgAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCt                                                                                                                 <  1:511999/236‑1 (MQ=255)                                                                                         gcgAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGcc                                                                                                                  <  1:810434/234‑1 (MQ=255)                                                                                          cgAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGa                                                                                                                                             <  2:995841/206‑1 (MQ=255)                                                                                             aTACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCGGGCAAC                                                                                                                                                                                                          >  2:292927‑M1/1‑142 (MQ=255)                                                                                              tACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  1:128306/220‑1 (MQ=255)                                                                                                         ggTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTc                                                                                                 >  1:862097/1‑235 (MQ=255)                                                                                                           tCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGc                                                                                                               >  1:305811/1‑219 (MQ=255)                                                                                                            cAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCt                                                                                                                 >  2:991321/1‑216 (MQ=255)                                                                                                                cTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGtgttgtt                                                                                         <  1:489754/236‑1 (MQ=255)                                                                                                                cTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGCGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCAt                                                                                                                                                                                  >  2:327616/1‑147 (MQ=255)                                                                                                                     aaGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  1:691832/197‑1 (MQ=255)                                                                                                                      aGCGCCGATGGTGAGCGGTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGAactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcg                                                                                                                                                   <  2:463744‑M1/172‑54 (MQ=255)                                                                                                                       gcgcCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGa                                                                                                                       >  1:820909/1‑199 (MQ=255)                                                                                                                       gcgcCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTg                                                                                                                >  1:709619/1‑206 (MQ=255)                                                                                                                       gcgcCGATGGTGAGCGTGTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCa                                                                                                                                                                  <  2:149252/156‑1 (MQ=255)                                                                                                                            gctGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  2:66477/188‑1 (MQ=255)                                                                                                                            gATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTg                                                                                                       >  2:612508/1‑210 (MQ=255)                                                                                                                                      ggttCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGCGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAgccgcc                                                                                                                           <  2:940223/178‑1 (MQ=255)                                                                                                                                             gCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGcaca                                                                                                            <  1:523485/188‑1 (MQ=255)                                                                                                                                              ccGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTcgg                                                            <  1:991324/235‑1 (MQ=255)                                                                                                                                                    gtgCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGa                                                                                                                                             <  1:425490/148‑1 (MQ=255)                                                                                                                                                    gtgCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGa                                                                                                                                             >  2:425487/1‑148 (MQ=255)                                                                                                                                                            cgtgctgcCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCg                                                                           <  1:9897/204‑1 (MQ=255)                                                                                                                                                               gctgaCCGGCGACGAGCAGGTGGTGGTGGACGCCAAGGTCGGCCGCACGGCGTACCAGCAGTTCGTGGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCa                                                                                                                                                                             <  2:16785/105‑1 (MQ=255)                                                                                                                                                                ctgcCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGcaca                                                                                                            <  2:401005/169‑1 (MQ=255)                                                                                                                                                                 tgcCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTg                                                                                                       >  1:991408/1‑173 (MQ=255)                                                                                                                                                                 tgcCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGa                                                                          <  1:929104/202‑1 (MQ=255)                                                                                                                                                                  gcCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGAactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggcagcatgatcagcacatccggctggaaacgctcaccatcggcgcttttcaggctgacctgggtctggtattcgcggcccttttccaggccggcct                                               >  1:357908‑M1/1‑75 (MQ=255)                                                                                                                                                                      ggCGACAAGCAGGTGGTGGGGGACGCCAAGGTCAGCCTCACGGCGTACCGGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTcgg                                                            <  1:159157/211‑1 (MQ=255)                                                                                                                                                                       gCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTg                                                                                  <  1:568517/188‑1 (MQ=255)                                                                                                                                                                       gCGACAAGCAGGTGGTGGTGGACGCCAAGGTCACCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGcc                                                                                                                  <  2:847433/156‑1 (MQ=255)                                                                                                                                                                        cGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTtcgttgccggcaacgaactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggcagcatgatcagcacatccggctggaaccgctcaccatcggcgct                                                                                                 <  2:463744‑M2/172‑120 (MQ=255)                                                                                                                                                                           cAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCt                                                                                                                          >  2:824493/1‑144 (MQ=255)                                                                                                                                                                             tgcAGGTGGGGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTtcgttgccggcaacgaactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggcagcatgatcagcacatccggctggaaacgctcaccatcggcgcttttcaggctgacctgggtctggtattcgcggcccttttcca                                                        >  2:357905‑M2/2‑48 (MQ=255)                                                                                                                                                                                aGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGAc                                                                                                    <  1:735724/161‑1 (MQ=255)                                                                                                                                                                                      tggtggACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGCCCTGCAGgccgagcc                                         <  2:556991/214‑1 (MQ=255)                                                                                                                                                                                        gtggACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGccc                                                      >  2:820261/1‑199 (MQ=255)                                                                                                                                                                                           agagacagggtcagcctcACGGCGTACCAGCAGTTCGTTGCCGGCAACGAactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggcagcatgatcagcacatccggctggaaacgctcaccatcggcgcttttcaggctgacctgggtctggtattcgcggcccttttccaggccggcatgttccagcacacgttcgaggataagctcaccc               <  1:378457‑M1/227‑186 (MQ=255)                                                                                                                                                                                                             aCGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGCCCTGCAGgccgagccg                                        <  1:941758/192‑1 (MQ=255)                                                                                                                                                                                                              cGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGa                                                                                                                                             <  2:195616/90‑1 (MQ=255)                                                                                                                                                                                                                 cGTACCAGCAGTtcgttgccggcaacgaactgctggtacgccgtgaggctgaccttggcgtccaccaccacctgcttgtcgccgggcagcatgatcagcacatccggctggaaacgctcaccatcggcgcttttcaggctgacctgggtctggtattcgcggcccttttccaggccggcatgttccagca                                      <  2:378454‑M2/190‑179 (MQ=255)                                                                                                                                                                                                                      cagcagTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGAt  <  1:309218/221‑1 (MQ=255)                                                                                                                                                                                                                      cagcagTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTCCGTGTTGTTGTTCGTGCCCATCGAggc                                                                       >  2:932156/1‑152 (MQ=255)                                                                                                                                                                                                                            ttCGTTGCCGGAAACGACGAAGTTGCACTCAAGCAGCATGTGCAGTCGCTGCGCACCCACGTCAAAGGCCt                                                                                                                                                  <  2:250706/71‑1 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                       CAGGCCTTGAAGGGCCAGAAAACCCAGGGTAACTGGGGTGAGCTTATCCTCGAACGTGTGCTGGAACATGCCGGCCTGGAAAAGGGCCGCGAATACCAGACCCAGGTCAGCCTGAAAAGCGCCGATGGTGAGCGTTTCCAGCCGGATGTGCTGATCATGCTGCCCGGCGACAAGCAGGTGGTGGTGGACGCCAAGGTCAGCCTCACGGCGTACCAGCAGTTCGTTGCCGGCAACGACGAAGTTGCGCTCAAGCAGCATGTGCAGTCGCTGCGCAGCCACGTCAAAGGCCTGTCGAGCAAGGACTACAGCCGCCTCGAAGGCCTGCACAGCCTGGACTTCGTGTTGTTGTTCGTGCCCATCGAGGCGGCCTTTTCGGCGGCCCTGCAGGCCGAGCCGAACCTGTTCCAGGAGGCCTTCGACCGGCAGATCGTGAT  >  AE015451/1886024‑1886457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.