New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3779614	48 (0.830)	4 (0.070)	4/334	NT	7.6%	coding (65/1575 nt)	nikA	nickel ABC transporter periplasmic binding protein
	?	AE015451	= 3779631	51 (0.910)					coding (82/1575 nt)	nikA	nickel ABC transporter periplasmic binding protein

GCCACCCGCCGATCGATGACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTCGCGACGGCGTGCGCTTCAGC  >  AE015451/3779401‑3779861                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                       gCCACCCGCCGATCGATGACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGTATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgc                                                                                                                                                                                                                                    <  1:1042711‑M2/235‑5 (MQ=255) gCCACCCGCCGATCGATGACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgca                                                                                                                                                                                                                                   >  1:476708‑M2/1‑231 (MQ=255)        gccgATCGATGACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGc                                                                                                                                                                                                                            <  1:490135/236‑1 (MQ=255)                  gACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGc                                                                                                                                                                                                                   <  2:102879/235‑1 (MQ=255)                                                ggTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgcacgcagcaagaagaaggaggccccacagggcgggctttcgtttacca                                                                                                                                                                                     >  1:386592‑M2/1‑184 (MQ=255)                                                  tGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCggg                                                                                                                                                                                   >  2:883524/1‑235 (MQ=255)                                                   gATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGc                                                                                                                                                                                                                   <  1:379411/202‑1 (MQ=255)                                                       cGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAg                                                                                                                                                                                                                             >  2:263357/1‑188 (MQ=255)                                                       cGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTg                                                                                                                                                                                                              >  1:974298/1‑203 (MQ=255)                                                           gCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAACGCCGGGCCGCTCGAcc                                                                                                                                                                         >  1:1022824/1‑236 (MQ=255)                                                             aTTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGAc                                                                                                                                                                          >  1:395702/1‑233 (MQ=255)                                                               tCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTa                                                                                                                                                                                                         <  2:184924/200‑1 (MQ=255)                                                                   tAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGTGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAg                                                                                                                                                                                                                         <  2:573801/180‑1 (MQ=255)                                                                                   gatTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgcacgcagc                                                                                                                                                                                                                             >  1:581017‑M2/1‑149 (MQ=255)                                                                                                 atcatACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGc                                                                                                                                    <  1:1036084/235‑1 (MQ=255)                                                                                                    agaCCCACCACACTTTCGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGa                                                                                                                                                 <  1:9966/217‑1 (MQ=255)                                                                                                      aCCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGCAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGCGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGCGTACTCCTGGCCtgtg                                                                                                                                                                                            >  1:847847/1‑174 (MQ=255)                                                                                                        ccacacCACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCTGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgcacgcagcaagaagaaggaggccccacagg                                                                                                                                                                                                       >  2:726798‑M2/1‑128 (MQ=255)                                                                                                              cacTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGCGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGCATGCCGGGCCGCTCGACCcg                                                                                                                                                                       >  2:217710/1‑187 (MQ=255)                                                                                                              cacTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGcg                                                                                                                                                                              >  1:1003101/1‑179 (MQ=255)                                                                                                              cacTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGCCCCGCGTGGCTATTCCCCCaa                                                                                                                                                      >  1:196148/1‑204 (MQ=255)                                                                                                              cacTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCa                                                                                                                                                   >  1:243982/1‑207 (MQ=255)                                                                                                               acTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCgc                                                                                                                                                                           >  2:273873/1‑181 (MQ=255)                                                                                                               acTGTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGc                                                                                                                                                                                       <  1:19294/170‑1 (MQ=255)                                                                                                                       cTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCt                                                                                                                                                                              >  2:441297/1‑171 (MQ=255)                                                                                                                        tACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTAc                                                                                                                                            <  1:761778/204‑1 (MQ=255)                                                                                                                         aCGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCCGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCgcgcacgcagcaagaagaaggaggccccacagggcgggctttcgtttaccagg                                                                                                                                                                                   >  2:242644‑M2/1‑111 (MQ=255)                                                                                                                            gCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCta                                                                                                         >  1:894224/1‑235 (MQ=255)                                                                                                                             ccTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCcg                                                                                                                                                                       >  2:330282/1‑172 (MQ=255)                                                                                                                               gccGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGcc                                                                                                                                   <  1:312947/205‑1 (MQ=255)                                                                                                                                       aGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCGGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGAGGTACGCCCAGGCCATGGTCTATGAAccc                                                                                                                    <  1:555846/213‑1 (MQ=255)                                                                                                                                           ggggCCGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGcc                                                                                                                                                                                                <  2:247029/133‑1 (MQ=255)                                                                                                                                           ggggACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTAc                                                                                          <  1:883527/235‑1 (MQ=255)                                                                                                                                                   aGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTccccc                                                                                                                                                        >  2:183377/1‑165 (MQ=255)                                                                                                                                                     tgtgAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGAt                                                                                                                                                <  1:1050645/171‑1 (MQ=255)                                                                                                                                                          agcagcagcCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATAccg                                                                                                    <  1:720953/210‑1 (MQ=255)                                                                                                                                                            cagcagcCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAAccc                                                                                                                    >  2:956202/1‑192 (MQ=255)                                                                                                                                                            cagcagcCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAAccc                                                                                                                    <  1:956205/192‑1 (MQ=255)                                                                                                                                                                             caaGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCt                                                                                                                            <  1:213664/166‑1 (MQ=255)                                                                                                                                                                             aaaGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTc                                                                                                                                                            <  1:209856/135‑1 (MQ=255)                                                                                                                                                                                   cgcccTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCAtggctgg                                                                         >  2:1056330/1‑212 (MQ=255)                                                                                                                                                                                      ccTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGgacgac                                               <  1:672260/235‑1 (MQ=255)                                                                                                                                                                                                  cctTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCaa                                          >  2:362026/1‑228 (MQ=255)                                                                                                                                                                                                  cctTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCAGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAAccc                                                                                                                    <  1:468237/154‑1 (MQ=255)                                                                                                                                                                                                      cttcttGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGt                               >  1:1021160/1‑235 (MQ=255)                                                                                                                                                                                                          ttGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGACGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCa                                                                                                                                                       <  2:324780/111‑1 (MQ=255)                                                                                                                                                                                                             ctgcGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGc                                                                                                                                                                                       <  2:8341/76‑1 (MQ=255)                                                                                                                                                                                                              tgcgtgcgCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGCCCGCAGCTGGTGTACTCCTGGCCt                                                                                                                                                                                               >  2:17568/1‑67 (MQ=255)                                                                                                                                                                                                               gcgtgcgCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTcg                     >  1:996385/1‑236 (MQ=255)                                                                                                                                                                                                               gcgtgcgCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGCTGCGCTATACCGCCGCGGGTa                                                                                           >  2:337510/1‑166 (MQ=255)                                                                                                                                                                                                                cgtgcgCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTcg                     >  1:510813/1‑235 (MQ=255)                                                                                                                                                                                                                     gctgctGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTAc                                                                                          <  1:178453/161‑1 (MQ=255)                                                                                                                                                                                                                     gctgctGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTAc                                                                                          >  2:178451/1‑161 (MQ=255)                                                                                                                                                                                                                     gctgctGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCAtc                                                                              >  2:657008/1‑172 (MQ=255)                                                                                                                                                                                                                     gctgctGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGAc                                       <  2:834589/212‑1 (MQ=255)                                                                                                                                                                                                                       tgctgcGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTCGCGACGGc              <  1:590032/235‑1 (MQ=255)                                                                                                                                                                                                                             gcCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTCGCGACGGCGTgcg         <  2:570276/234‑1 (MQ=255)                                                                                                                                                                                                                                   cAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTCGCGACGGCGTGCGCTTCAGc  >  1:430283/1‑235 (MQ=255)                                                                                                                                                                                                                                    aGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTacac                                 <  1:787567/203‑1 (MQ=255)                                                                                                                                                                                                                                    aGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTacac                                 >  2:787564/1‑203 (MQ=255)                                                                                                                                                                                                                                      ccgcgccgcCGCGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAAccc                                                                                                                    <  2:148236/118‑1 (MQ=255)                                                                                                                                                                                                                                      ccgcgccgcCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCg                                                     <  1:152044/181‑1 (MQ=255)                                                                                                                                                                                                                                      ccgcgccgcCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCCGGCTGAGGCCTGGCAg                                                           >  2:56734/1‑175 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                       GCCACCCGCCGATCGATGACGTCGAGCAGCTCTTCATCCAGCGTGATGGTGATTCGTTGCATTCTGTAACTTCCGGTAAGATGATTTCACGTAGACATCATACCCACCACACTTTAGCCTACGGCCTCCGTGAAAGTGGGGGACGCAGTGTGAAGCAGCAGCCTGGTAAACGAAAGCCCGCCCTGTGGGGCCTCCTTCTTCTTGCTGCGTGCGCTGCTGCGCCGGCCAGCCGCGCCGCCGAGCAAGGGCCGCAGCTGGTGTACTCCTGGCCTGTGAATGCCGGGCCGCTCGACCCGCGTGGCTATTCCCCCAACCAGATGTACGCCCAGGCCATGGTCTATGAACCCCTGGTGCGCTATACCGCCGCGGGTACGCTGGAGCCATGGCTGGCTGAGGCCTGGCAGGTTTCGGACGACGGCAAGACCTACACGTTCACCCTTCGCGACGGCGTGCGCTTCAGC  >  AE015451/3779401‑3779861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.