New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 3794442 =40 (0.690)5 (0.090) 5/326 NT 11.0% coding (81/1191 nt) PP_3355 Beta‑ketothiolase
?AE015451 3794568 = 43 (0.780)intergenic (‑46/+2) PP_3355/fcs Beta‑ketothiolase/feruloyl‑CoA‑synthetase

ATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAGCGAACCAACTGCG  >  AE015451/3794340‑3794800
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                        
aTGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAgg                                                                                                                                                                                                                                   >  1:559634/1‑236 (MQ=255)
  ggCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGcc                                                                                                                                                                                                                                 >  1:138204/1‑236 (MQ=255)
  ggCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGc                                                                                                                                                                                                                                  >  1:594634/1‑235 (MQ=255)
  ggCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGGGCGCACCATCTGGACGCTGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGc                                                                                                                                                                                                                                  >  1:349298/1‑235 (MQ=255)
                      cagcggcgcgccgctcaggtcgaggcgctgtaccgtggcgaagaccccgacgcattgcacgccaaggtgcggccttgagtgcggccgggctgtgcaccgtcttcgaggacacggccatcgtccagatggtgcgcacgccctgggtcgacctgggtggcgcattggccgcgatctcgcccatcgacctgggcattcaggccggccgcAc                                                                                                                                                                                                                                         <  1:468108‑M2/2‑1 (MQ=255)
                             tGGCCTACGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGGGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGt                                                                                                                                                                                                                     <  2:827979/221‑1 (MQ=255)
                             gcgccgctcaggtcgaggcgctgtaccgtggcgaagcccccgacgcattgcacgccaaggtgcggccttgagtgcggccgggctgtgcaccgtcttcgaggacacggccatcgtccagatggtgcgcacgccctgggtcgacctgggtggcgcattggccgcgatctcgcccatcgacctgggcattcaggccggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGt                                                                                                                                                                                                      <  1:183051‑M2/37‑1 (MQ=255)
                                                            gTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGc                                                                                                                                                                                                                   <  1:405033/192‑1 (MQ=255)
                                                                 accccgacgcattgcacgccaaggtgcggccttgagtGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGGCTTCGCCACGGTACAGCGCCTCGACCTGAGCGgcgc                                                                                                                                                                  <  1:183051‑M1/199‑1 (MQ=255)
                                                                        gggggCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCAcc                                                                                                                                                                                                                            <  2:205922/170‑1 (MQ=255)
                                                                        aGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACa                                                                                                                                                                                       >  2:811165/1‑208 (MQ=255)
                                                                                  gCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGgc                                                                                                                                                  <  1:695167/235‑1 (MQ=255)
                                                                                      cACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTgcagc                                                                                                                                                       <  1:225499/226‑1 (MQ=255)
                                                                                       aCGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGt                                                                                                                                                                                          <  2:1074356/190‑1 (MQ=255)
                                                                                                  ccGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCtcagg                                                                                                                                                        <  2:842454/213‑5 (MQ=255)
                                                                                                   cgcgcgGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAg                                                                                                                                  <  2:645634/234‑1 (MQ=255)
                                                                                                    gtGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTg                                                                                                                                                           <  1:468108‑M1/206‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGc                                                                                                                                                                                                                                  <  2:895861‑M1/133‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATg                                                                                                                                                                                                               <  2:1078777‑M1/152‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGt                                                                                                                                                                                                      <  2:691212‑M1/161‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcggcg                                                                                                                                                                   <  1:871892‑M1/196‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcggcg                                                                                                                                                                   >  2:871889‑M1/1‑196 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcggc                                                                                                                                                                    <  2:362335‑M1/195‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCt                                                                                                                              <  2:911098‑M1/233‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGt                                                                                                                           <  1:171031‑M1/236‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGGCTTCGCCACGGGACAGCGCCTCGACCTGAGCGGCGcgcc                                                                                                                                                               <  1:107524‑M1/200‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGGCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGgcgc                                                                                                                                                                  <  1:98990‑M1/197‑1 (MQ=255)
                                                                                                        GGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGGGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCAc                                                                                                                                                     <  1:105980‑M1/210‑1 (MQ=255)
                                                                                                             GCCTGAATGCCCAGGTTGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGCTCTTCGCCAc                                                                                                                                                                                             <  1:369406‑M1/165‑1 (MQ=255)
                                                                                                                          ggTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGAACTGAGCGgcgc                                                                                                                                                                  >  1:827192/1‑179 (MQ=255)
                                                                                                                           ttcgaggacacggccatcgtccagatggtgcgcacgccctgggtcgacctgggtggcgcattggccgcgatctcgcccatcgacctgggcattcaggccggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGcgccgc                                                                                                                                                             >  2:73191‑M2/106‑183 (MQ=255)
                                                                                                                           gTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGtc                                                                                                        <  1:393534/236‑1 (MQ=255)
                                                                                                                            tCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGGGCAATGCGTCGGGGt                                                                                                                                                                                                      >  2:1020763/1‑141 (MQ=255)
                                                                                                                                   gCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGcct                                                                                                         >  2:587257/1‑225 (MQ=255)
                                                                                                                                      ggccatcgtccagatggtgcgcacgccctgggtcgacctgggtggcgcattggccgcgatctcgcccatcgacctgggcattcaggccggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTgcag                                                                                                                                                        >  2:505593‑M2/95‑177 (MQ=255)
                                                                                                                                         tCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACATCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCt                                                                                                                              >  1:114780/1‑200 (MQ=255)
                                                                                                                                                  aggcgcCACCCAGGCCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCtcagg                                                                                                                                                        <  2:286821/163‑5 (MQ=255)
                                                                                                                                                   tGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCAGCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCcagcag                                                                                <  1:399018/236‑1 (MQ=255)
                                                                                                                                                    gcgcCCCCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCtgattg                                                                                                                                        <  2:344853/179‑1 (MQ=255)
                                                                                                                                                      gcgcgcacgccctgggtcgacctgggtggcgcattggccgcgatctcgcccatcggcctgggcattcaggccggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAgc                                                                                                                                                                                     <  1:933578‑M2/54‑1 (MQ=255)
                                                                                                                                                                  gACCCAGGGCGTGCGCGCCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcg                                                                                                                                                                      <  2:941022/135‑1 (MQ=255)
                                                                                                                                                                       aGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGAt                                                                 >  1:825914/1‑231 (MQ=255)
                                                                                                                                                                       aGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCACACTCCAAGCCGCACCTTGGCGTGCAATGCGTCGGTGTCTTCGCCa                                                                                                                                                                                              >  2:969224/1‑106 (MQ=255)
                                                                                                                                                                            gTGCGCACCATCTGGACGATGGCCGTGTCCTCGACGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTCGCGCGCAATGCGTc                                                                                                                                                                                                           >  2:273712/1‑88 (MQ=255)
                                                                                                                                                                                 cACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGcgg                                                          >  1:280071/1‑226 (MQ=255)
                                                                                                                                                                                  aacATCTGGACGATGGCCGTGTCCTCGAAGACGGTGGACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcggcg                                                                                                                                                                   <  1:53962/120‑1 (MQ=255)
                                                                                                                                                                                  aacATCTGGACGATGGCCGTGTCCTCGAAGACGGTGGACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAgcggcg                                                                                                                                                                   >  2:53961/3‑122 (MQ=255)
                                                                                                                                                                                  aCCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGTACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGc                                                                                                           >  2:591731/1‑178 (MQ=255)
                                                                                                                                                                                      attggccgcgatctcgcccatcgacctgggcattcaggccggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTggg                                             <  1:73193‑M2/190‑1 (MQ=255)
                                                                                                                                                                                             gATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACg                                                                                                                                                    <  2:105978/126‑1 (MQ=255)
                                                                                                                                                                                                 gCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCa                                           >  2:470218/1‑227 (MQ=255)
                                                                                                                                                                                                  ccGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTc                                                                                                                          >  2:364853/1‑147 (MQ=255)
                                                                                                                                                                                                  ccGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTgg                                                         >  2:990975/1‑212 (MQ=255)
                                                                                                                                                                                                   cGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGc                                                                                                                                                                                                >  2:487818/1‑76 (MQ=255)
                                                                                                                                                                                                   cGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGc                                                                                                                                                                                                <  1:487821/76‑1 (MQ=255)
                                                                                                                                                                                                   cGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACgg                                                                                                                                                                                           >  2:65194/1‑81 (MQ=255)
                                                                                                                                                                                                   cGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCtt                                                                                                                             >  2:767119/1‑143 (MQ=255)
                                                                                                                                                                                                   cGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGAGTGATCGAGCCCTTGTCGGTGCTTTCACCGGCGTCGATCGACGGCGGCTCGGCcac                                                                                   >  1:218429/1‑184 (MQ=255)
                                                                                                                                                                                                      gtCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTg                                                          <  1:317911/207‑1 (MQ=255)
                                                                                                                                                                                                         cTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAAGACGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATcg                                        <  2:559631/222‑1 (MQ=255)
                                                                                                                                                                                                          tCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGCCGTCGATCGAcgccg                                                                                             <  1:1086031/168‑1 (MQ=255)
                                                                                                                                                                                                              aGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTccagc                      >  1:438228/1‑235 (MQ=255)
                                                                                                                                                                                                                      cacaGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGa                                                                                                                     >  2:264350/1‑132 (MQ=255)
                                                                                                                                                                                                                       acaGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAGc              >  1:974380/1‑234 (MQ=255)
                                                                                                                                                                                                                       acaGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAGCg             >  2:788486/1‑235 (MQ=255)
                                                                                                                                                                                                                        caGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGt                  <  1:837961/229‑1 (MQ=255)
                                                                                                                                                                                                                              ggccgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCg                                                                              >  2:918617‑M2/7‑163 (MQ=255)
                                                                                                                                                                                                                                 cgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGt                  >  2:795963‑M2/4‑220 (MQ=255)
                                                                                                                                                                                                                                 cgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAg               >  2:655203‑M2/4‑223 (MQ=255)
                                                                                                                                                                                                                                 cgcACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAGCGAACCAACTgcg  <  1:458850‑M2/233‑1 (MQ=255)
                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                        
ATGGCGTGGCAGCATGTAGGCGTCGAAGCTGGCCTGAGCCATGCTGCCGGCGAGCACACTGTCTACCGCCTGAGGGGCGGCAGCTGCACGTGCCAGCACCGCGCGGCCGGCCTGAATGCCCAGGTCGATGGGCGAGATCGCGGCCAATGCGCCACCCAGGTCGACCCAGGGCGTGCGCACCATCTGGACGATGGCCGTGTCCTCGAAGACGGTGCACAGCCCGGCCGCACTCAAGGCCGCACCTTGGCGTGCAATGCGTCGGGGTCTTCGCCACGGTACAGCGCCTCGACCTGAGCGGCGCGCCGCTGCAGCACGGCGCGCTGATTGATCGAGCCCTTGTCGGTGATTTCACCGGCGTCGATCGACGGCGGCTCGGCCAGCAGCGACAGCCATTCGATACGGCTGGCGTTGCCTTGGGCATCGCGGTTCAAGCGCTCCAGCCAGTCAGCGAACCAACTGCG  >  AE015451/3794340‑3794800

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.