New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 4417589 =65 (1.130)5 (0.090) 5/314 NT 7.7% coding (482/552 nt) PP_3905 Transcriptional regulator, LuxR family
?AE015451 4417603 = 61 (1.150)coding (496/552 nt) PP_3905 Transcriptional regulator, LuxR family

AAATCGCCAAGCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAGGGGAAGACCTGGGATGTGGTCG  >  AE015451/4417382‑4417838
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
aaaTCGCCAAGCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGtt                                                                                                                                                                                                                               >  1:303394/1‑236 (MQ=255)
     gCCAAGCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAAt                                                                                                                                                                                                                          >  1:261236/1‑236 (MQ=255)
         aGCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGt                                                                                                                                                                                                                       <  1:749190/235‑1 (MQ=255)
          gCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTc                                                                                                                                                                                                                     <  1:524378/236‑1 (MQ=255)
                  gCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCTcccc                                                                                                                                                                                                                                   >  1:257224/1‑213 (MQ=255)
                      cAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCg                                                                                                                                                                                                            <  2:566059/233‑1 (MQ=255)
                        gCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGc                                                                                                                                                                                                        >  1:743811/1‑235 (MQ=255)
                           agagCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTc                                                                                                                                                                                                                     >  1:867165/1‑219 (MQ=255)
                             agCGGCGAAGAGAACCGCATCGGGGACGCAATGCTGAAGCGCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGc                                                                                                                                                                                                              <  1:78358/224‑1 (MQ=255)
                                tctggcgaaggcttcgttgcgcgcttcctggctgcgttcaagcaacgctgcgagcaccattcgcttgtcctcgaaagctttatgcacggctgtctgcatgtggtgatcctcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcgaacttgggcggtgcggcgctccggagcgcc                                                                                                                                                                                                                                             <  2:873284‑M2/1‑1 (MQ=255)
                                   gTAGGGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATAcc                                                                                                                                                                                             <  1:597642/235‑1 (MQ=255)
                                         aaaCGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTg                                                                                                                                                                                      <  1:350185/236‑1 (MQ=255)
                                          gaCGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTg                                                                                                                                                                                      <  2:562761/234‑1 (MQ=255)
                                               gttgcgcgcttgctggctgcgttcaagcaatgctgcgagcaccattcgcttgtcctcgaaagctttatgcacggctggctgcatgtggtgatcctcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcgaacttgggcggtgcgGCGCTCCGGAGCGCCGAAcc                                                                                                                                                                                                                                        >  1:147669‑M1/161‑180 (MQ=255)
                                                 cGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAgg                                                                                                                                                                                                         >  1:245905/1‑209 (MQ=255)
                                                     gACGCAATGCTGAAGCGCAAGGTTGCCCGGCGCGACGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCAGGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTGCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAgg                                                                                                                                                                          <  1:37863/236‑1 (MQ=255)
                                                      aCGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGAAGCGCCGCACCGCCCAAGACCGAATc                                                                                                                                                                                                                         >  2:236723/1‑188 (MQ=255)
                                                        gCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGAt                                                                                                                                                                        <  1:648560/235‑1 (MQ=255)
                                                        gCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGAATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGAt                                                                                                                                                                        <  2:1007641/235‑1 (MQ=255)
                                                          aaTGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATc                                                                                                                                                                       <  2:910656/234‑1 (MQ=255)
                                                                  aGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGc                                                                                                                                                              <  1:17645/235‑1 (MQ=255)
                                                                    cTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGc                                                                                                                                                              <  2:376100/233‑1 (MQ=255)
                                                                                 ggCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcgc                                                                                                                                                                     >  2:624914/1‑211 (MQ=255)
                                                                                      gccgcGATGGTCGCCGAGGCAATGCGTCGCCAGCTCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGcgcggcgatc                                                                                                                                                                                                                                       <  2:157198/142‑5 (MQ=255)
                                                                                                      gggCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAAt                                                                                                                         <  2:743808/235‑1 (MQ=255)
                                                                                                          aaTGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGa                                                                                                                                     <  1:320849/220‑1 (MQ=255)
                                                                                                          aaTGCGTCGCCAGATCATCAGCCCTCCCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGc                                                                                                                             <  2:404714/228‑1 (MQ=255)
                                                                                                               gTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGaccca                                                                                                                                                                                 <  2:835748/171‑1 (MQ=255)
                                                                                                                  tgcacggctgtctgcatgtggtgatcctcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcgaacttgggcggtgcgGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCg                                                                                                                                                                                                            >  2:857044‑M1/94‑141 (MQ=255)
                                                                                                                  gCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAg                                                                                                              <  1:1058297/235‑1 (MQ=255)
                                                                                                                      cggctgtctgcatgtggtgatcctcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcgaacttgcgcggtgcgGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTc                                                                                                                                                                                                    >  2:446104‑M1/90‑145 (MQ=255)
                                                                                                                          atcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCTTTCGAATACCACGCCt                                                                                                                                                                                       <  1:789273/154‑1 (MQ=255)
                                                                                                                           tcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGa                                                                                                    <  1:507972/236‑1 (MQ=255)
                                                                                                                           tcaGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGa                                                                                                    <  1:865892/236‑1 (MQ=255)
                                                                                                                             aGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGaa                                                                                                   >  1:777716/1‑235 (MQ=255)
                                                                                                                                      tGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGagc                                                                                                                                                                                   >  2:590463/1‑144 (MQ=255)
                                                                                                                                      tGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAgg                                                                                         >  1:698380/1‑236 (MQ=255)
                                                                                                                                       gCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGa                                                                                                                                     <  1:945867/191‑1 (MQ=255)
                                                                                                                                         atcctcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcgaacttgggcggggcggcgctccggagcgcCGCACCGCCCAAGGTCGAATCGTTCGCAAGGCCGGGGCCTTCGAATACCACGCCTGac                                                                                                                                                                                    >  2:401949‑M2/85‑142 (MQ=255)
                                                                                                                                          tCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCg                                                                                                                 >  1:1068310/1‑208 (MQ=255)
                                                                                                                                            cTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCtt                                                                                                                                         <  2:340049/182‑1 (MQ=255)
                                                                                                                                             tcgggtgggtcaggcgtggtattcgaaggcctcggccttgcgaacgattcggaattgtgcgttgcggcgctccggagcgcCGCACCgcccc                                                                                                                                                                                                                                   >  1:583825‑M2/81‑90 (MQ=255)
                                                                                                                                             tGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAgcg                                                                                    >  2:482870/1‑234 (MQ=255)
                                                                                                                                                ttGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAgg                                                                                                                                                                          <  2:272254/145‑1 (MQ=255)
                                                                                                                                                ttGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGa                                                                                                                           >  1:276740/1‑192 (MQ=255)
                                                                                                                                                 tGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGcc                                                                                                                                                      >  2:219872/1‑164 (MQ=255)
                                                                                                                                                 tGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACa                                                                                                                                >  1:199450/1‑186 (MQ=255)
                                                                                                                                                  gCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCtt                                                                                                      <  1:804235/211‑1 (MQ=255)
                                                                                                                                                     gtcaggcgtggtattcgaaggccccggccttgcgaacgattcgaccttgggcggtgcgGCGCTCCGGAGCGCCGCCCCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGAt                                                                                                                                                                        >  2:401949‑M1/59‑142 (MQ=255)
                                                                                                                                                     aGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGAc                                                                                                                                 >  2:203130/1‑181 (MQ=255)
                                                                                                                                                     aGCCTCATCGCCATGCATGCGGTGATCGACGACAGAGACCCCAAGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCAAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCCGTCAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCATGAACGCAGTCAGGAAgcgc                                                                                   >  1:1030509/1‑227 (MQ=255)
                                                                                                                                                        cTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGacccg                                                                                                                                                                                 <  1:208914/130‑2 (MQ=255)
                                                                                                                                                         tCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCtt                                                                      <  1:603877/236‑1 (MQ=255)
                                                                                                                                                          cATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGGGCATAAAGCttt                                                                                                                                        >  2:212241/1‑169 (MQ=255)
                                                                                                                                                           aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCTCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCg                                                                    <  1:603009/236‑1 (MQ=255)
                                                                                                                                                           aTCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATcac                                                                                                                                                                     <  2:302095/139‑1 (MQ=255)
                                                                                                                                                                    catgcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCg                                                           <  1:482873/236‑1 (MQ=255)
                                                                                                                                                                    catgcGGTGATCGACGACAGCGACCCCATGCGCCGCGACCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGGCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACTGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCTTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCg                                                           >  1:1027150/1‑236 (MQ=255)
                                                                                                                                                                     gaaggcctcggccttgcgaacgattcgaacttgggcggtgcggcgctccggagcgcCGCACCGCGCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCg                                                                                                                                                     >  2:446104‑M2/57‑145 (MQ=255)
                                                                                                                                                                     atgcGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCAACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCag                                                                               >  2:603006/1‑214 (MQ=255)
                                                                                                                                                                             cggccttgcgaacgattcgaacttgggcggtgcggcgctccggagcgcCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCa                                                                                                                                                 >  2:857044‑M2/49‑141 (MQ=255)
                                                                                                                                                                             aTCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGa                                                   <  1:674295/235‑1 (MQ=255)
                                                                                                                                                                                gacgacAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCg                                                                                                                                                     >  2:405847/1‑134 (MQ=255)
                                                                                                                                                                                gacgacAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAgcg                                                                                    >  2:489941/1‑199 (MQ=255)
                                                                                                                                                                                gacgacAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGcc                                                <  1:69759/235‑1 (MQ=255)
                                                                                                                                                                                   gacAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGcccc                                              <  1:310820/234‑1 (MQ=255)
                                                                                                                                                                                           ccccATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCATGGCCGAGGCCTTCGAATACCACGCCt                                                                                                                                                                                       >  1:595439/1‑89 (MQ=255)
                                                                                                                                                                                           ccccATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCt                                                                                                                                                                                       <  2:595436/89‑1 (MQ=255)
                                                                                                                                                                                                   gccgcGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTgg                            >  1:1074645/1‑236 (MQ=255)
                                                                                                                                                                                                    ggggcggtgcgGCGCTCCGGAGCGCCGCAACGCACAATTCCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGa                                                                                                                                                                            >  1:583825‑M1/12‑91 (MQ=255)
                                                                                                                                                                                                        gATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAgg                                                     >  1:445991/1‑206 (MQ=255)
                                                                                                                                                                                                        gATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAgg                       >  1:315622/1‑236 (MQ=255)
                                                                                                                                                                                                         ggttcggcgctccggagcgcCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGCCAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCATTGCTTGAACGCAGCCAGCAAGCGCGCAAc                                                                              >  1:147669‑M2/21‑180 (MQ=255)
                                                                                                                                                                                                          tCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTAccc                                     >  2:966243/1‑219 (MQ=255)
                                                                                                                                                                                                          tCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAggg                      <  1:4241/235‑1 (MQ=255)
                                                                                                                                                                                                          tCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAggg                      >  1:944501/1‑235 (MQ=255)
                                                                                                                                                                                                              gGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGa                                                               <  2:873284‑M1/189‑1 (MQ=255)
                                                                                                                                                                                                                    ccGGAGGGCCGCACCGTCCAAGTTCGAATCGTTCGCAAGGCCg                                                                                                                                                                                                            <  1:815624/43‑1 (MQ=255)
                                                                                                                                                                                                                        agcgcCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACACGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAAt                                                             >  1:935341‑M2/6‑182 (MQ=255)
                                                                                                                                                                                                                        agcgcCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACACGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAAt                                                             <  2:935338‑M2/177‑1 (MQ=255)
                                                                                                                                                                                                                          CGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTACGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGa                                                                                                                                     >  2:339587‑M1/1‑108 (MQ=255)
                                                                                                                                                                                                                           GCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCGCCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAggg                      >  1:303646‑M1/1‑218 (MQ=255)
                                                                                                                                                                                                                             cgcACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGc                                                          <  2:910638/180‑1 (MQ=255)
                                                                                                                                                                                                                             cgcACCGCCCAAGTTCGAATCGTTCGCAAGGACGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAGGGGAAGACCTGGGATGTGGTCg  <  1:198748/236‑1 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
AAATCGCCAAGCACTTCGGCATCAGCGAGAGCGGCGTAGAGAAACGCATCGGTGACGCAATGCTGAAGCTCAAGGTTGCCCGGCGCGCCGCGATGGTCGCCGAGGCAATGCGTCGCCAGATCATCAGCCCTCTCTGCATCCTGCTTGCCAGCCTCATCGCCATGCATGCGGTGATCGACGACAGCGACCCCATGCGCCGCGATCGCCGCGCTCCGGAGCGCCGCACCGCCCAAGTTCGAATCGTTCGCAAGGCCGAGGCCTTCGAATACCACGCCTGACCCACCCGAGGATCACCACATGCAGACAGCCGTGCATAAAGCTTTCGAGGACAAGCGAATGGTGCTCGCAGCGTTGCTTGAACGCAGCCAGGAAGCGCGCAACGAAGCCTTCGCCAGAATCGCACAGGGAGCCCCGCGCTACCAAGCATCTGGCAAGGGGAAGACCTGGGATGTGGTCG  >  AE015451/4417382‑4417838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.