New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4667670	41 (0.710)	6 (0.110)	6/328	NT	13.1%	coding (1436/1854 nt)	nuoL	NADH:ubiquinone oxidoreductase, membrane subunit L
	?	AE015451	= 4667687	40 (0.720)					coding (1453/1854 nt)	nuoL	NADH:ubiquinone oxidoreductase, membrane subunit L

GCCAGCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACCTGCTGATCAGCCAC  >  AE015451/4667462‑4667917                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                       gCCAGCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGACGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGc                                                                                                                                                                                                                              >  1:603804/1‑236 (MQ=255)                            gCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGga                                                                                                                                                                                                   >  1:497102/1‑236 (MQ=255)                                   tGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAg                                                                                                                                                                                                              >  1:885495/1‑218 (MQ=255)                                   tGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCAc                                                                                                                                                                                             >  1:980970/1‑235 (MQ=255)                                        ggCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggcca                                                                                                                                                                                                                                 <  2:382671‑M2/194‑8 (MQ=255)                                                            gTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGCGCCATCGCCATCGCCGGt                                                                                                                                                                    >  1:493216/1‑235 (MQ=255)                                                            gTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACCTTCGTCGGCGCCTGGATCCCCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGc                                                                                                                                                                                                                                       <  2:275‑M2/168‑2 (MQ=255)                                                                      cGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGcc                                                                                                                                                                                                                 >  2:712856/1‑180 (MQ=255)                                                                       gCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCg                                                                                                                                                                                                                      >  2:886925/1‑174 (MQ=255)                                                                        ccTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCg                                                                                                                                                                      >  1:859654/1‑221 (MQ=255)                                                                          tGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCAcg                                                                                                                                                                                                          >  2:629984/1‑183 (MQ=255)                                                                          tGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGgccgcc                                                                                                                                                     >  1:776262/1‑236 (MQ=255)                                                                               ttCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggccagcggcgggg                                                                                                                                                                                                                        <  1:645537‑M2/164‑17 (MQ=255)                                                                                          ccACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggccagcggcggggtgatccaggcgc                                                                                                                                                                                                            <  1:1056086‑M2/165‑29 (MQ=255)                                                                                          ccACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggccagcggcggggtgatccaggcgc                                                                                                                                                                                                            >  2:1056083‑M2/1‑137 (MQ=255)                                                                                                 gAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCCGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTgccatc                                                                                                                                                                                <  1:6409/186‑1 (MQ=255)                                                                                                  aaGCCAAGACCGAAGCCCACGCTGGCCACGGCACCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCaa                                                                                                                                                                                                               <  2:953282/154‑1 (MQ=255)                                                                                                         gACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCa                                                                                                                      <  1:457669/236‑1 (MQ=255)                                                                                                            cGAAGCCCACGCTGGCCCCGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCa                                                                                                                      <  2:955976/233‑1 (MQ=255)                                                                                                                   cACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCGCGCGCTGGAGATCACCTCGGGTgccatcgccat                                                                                                                                                                           <  2:484718/173‑1 (MQ=255)                                                                                                                       cTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGGGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAg                                                                                                                     >  1:125229/1‑223 (MQ=255)                                                                                                                        tGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGGCGCTGGCCGGTGTGCGGCCGGAAAGCGccggccagcggcggggtgg                                                                                                                                                                                                                     <  2:887776‑M2/126‑20 (MQ=255)                                                                                                                                gCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGGCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCAt                                                                                                <  1:918373/235‑1 (MQ=255)                                                                                                                                gCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCa                                                                                                          <  2:821105/225‑1 (MQ=255)                                                                                                                                   tCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAgc                                                                                                                    <  1:751534/212‑1 (MQ=255)                                                                                                                                   tCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAgc                                                                                                                    >  2:751531/1‑212 (MQ=255)                                                                                                                                       ccACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCCTGcctg                                                                                                                                                                                                                           >  2:149939/1‑103 (MQ=255)                                                                                                                                            accTGCCGCTGGGCGTGCTGATCGTGCTGTCGTCTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGTTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTg                                                                                   <  2:561291/234‑1 (MQ=255)                                                                                                                                              cTGCCGCTGGGCGTGCTGATCGTGCTGCCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACGGTGGCATCGGTCGCGTCCTg                                                                                   >  2:763064/1‑234 (MQ=255)                                                                                                                                                gCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCg                                                                                <  1:436908/235‑1 (MQ=255)                                                                                                                                                 ccGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCg                                                                                <  1:741200/234‑1 (MQ=255)                                                                                                                                                      gggCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGccatcgccatcg                                                                                                                                                                         <  1:690085/140‑1 (MQ=255)                                                                                                                                                         cGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTggtggt                                                                      <  1:807107/236‑1 (MQ=255)                                                                                                                                                           tGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGgaga                                                                                                                                                                                                 >  2:363728/1‑111 (MQ=255)                                                                                                                                                               gATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCctg                                                                                                                                                              >  2:304256/1‑142 (MQ=255)                                                                                                                                                                aTCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCAGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTg                                                                <  1:575079/235‑1 (MQ=255)                                                                                                                                                                    tGCGGTCGCCTTTCGCCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggccagcggcggggtgatccaggcgccgacgaaagtcgacagc                                                                                                                                                                                           >  2:645534‑M2/1‑63 (MQ=255)                                                                                                                                                                                      gcgcCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGccggccagcggcggggtgatccaggcgccgacgaaag                                                                                                                                                                                                   >  1:887779‑M2/1‑45 (MQ=255)                                                                                                                                                                                      gcgcCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGAt                                             >  2:592088/1‑232 (MQ=255)                                                                                                                                                                                       ttccggcagcACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCt                                                       >  2:710112/10‑221 (MQ=255)                                                                                                                                                                                                   cccGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTgg                                                                                                                                                          <  2:294103/110‑1 (MQ=255)                                                                                                                                                                                                    ccgccgCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGcc                                                                                                                 <  2:405721/150‑1 (MQ=255)                                                                                                                                                                                                    ccgccgCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGt                           <  1:592091/236‑1 (MQ=255)                                                                                                                                                                                                    ccgccgCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGt                           <  1:971283/236‑1 (MQ=255)                                                                                                                                                                                                               cGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCa                                                                                                                                                                                                                <  2:569567/44‑1 (MQ=255)                                                                                                                                                                                                                 gtgtGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACctg              <  1:710115/236‑1 (MQ=255)                                                                                                                                                                                                                    tgctgcCGGAAAGCGCCGGCCATGCCCGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCa                                                                                                                      <  2:965668/129‑1 (MQ=255)                                                                                                                                                                                                                     gctgcCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACctgc             >  2:586382/1‑233 (MQ=255)                                                                                                                                                                                                                      ctgcCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCAc                                                                                                                                                                                                           <  1:436051/42‑1 (MQ=255)                                                                                                                                                                                                                             aaaGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACCTGCTGATCAGCcac  <  1:273662/236‑1 (MQ=255)                                                                                                                                                                                                                               cgcgcCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCGCCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCa                         <  1:201057/210‑1 (MQ=255)                                                                                                                                                                                                                                 cgcCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACCTGCTGATCACCca   >  2:545456/1‑231 (MQ=255)                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                       GCCAGCGGCAACACCGGCCTGCTGTATGCCGGCCTGGTAGGCGCGTTCATGACCTCGCTGTACACCTTCCGCCTGATCTTCATCGCCTTCCACGGCGAAGCCAAGACCGAAGCCCACGCTGGCCACGGCATCAGCCACTGGCTGCCGCTGGGCGTGCTGATCGTGCTGTCGACTTTCGTCGGCGCCTGGATCACCCCGCCGCTGGCCGGTGTGCTGCCGGAAAGCGCCGGCCATGCCGGTGGCGAAGCCAAGCACGCGCTGGAGATCACCTCGGGTGCCATCGCCATCGCCGGTATCCTGCTGGCCGCCCTGCTGTTCCTGGGCAAGCGCCGCTTCGTCAGCGCCGTCGCCAACAGTGGCATCGGTCGCGTCCTGTCGGCCTGGTGGTTCGCTGCCTGGGGCTTCGACTGGATCTACGACAAGCTTTTCGTCAAACCGTACCTGCTGATCAGCCAC  >  AE015451/4667462‑4667917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.