New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4902861	51 (0.880)	6 (0.110)	4/320	NT	11.1%	intergenic (+47/+72)	PP_4310/PP_4311	putative Hydantoin racemase/putative D‑amino acid dehydrogenase 2 small subunit
	?	AE015451	= 4902896	48 (0.890)					intergenic (+82/+37)	PP_4310/PP_4311	putative Hydantoin racemase/putative D‑amino acid dehydrogenase 2 small subunit

CGGTGGTGGATGGTGTGAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGTGTCGCTGGTCGCATCCCCGCCCATTCCACCGCCTGGCCATAATCCGCCGCCCTTGGCAGCGTCT  >  AE015451/4902675‑4903123                                                                                                                                                                                                                              |                                                                                                                                                                                                                                    cGGTGGTGGATGGTGTGAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCtt                                                                                                                                                                                                                        >  1:488553/1‑235 (MQ=255)                tgAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAagag                                                                                                                                                                                                           >  2:951055/1‑233 (MQ=255)                 gAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgta                                                                                                                                                                                                                                  <  2:840929‑M2/209‑4 (MQ=255)                      cAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAaga                                                                                                                                                                                                            <  2:830520/226‑1 (MQ=255)                      cAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAggccg                                                                                                                                                                                                       <  1:268090/231‑1 (MQ=255)                       aGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACACGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGaa                                                                                                                                                                                                              >  1:99216/1‑223 (MQ=255)                         cGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGc                                                                                                                                                                                                 <  1:951058/234‑1 (MQ=255)                              aCCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAAc                                                                                                                                                                                            <  2:674607/234‑1 (MQ=255)                                 aTTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCCTTAGCCGCGAAGAGGCCGGCCCGCTTAACGcat                                                                                                                                                                                        >  1:73437/1‑235 (MQ=255)                                       gAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTg                                                                                                                                                                                 <  1:260913/236‑1 (MQ=255)                                           cGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGa                                                                                                                                                                                                               >  1:62075/1‑202 (MQ=255)                                                    gcATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTgcg                                                                                                                                                                    <  1:442879/236‑1 (MQ=255)                                                      aTGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgtaggagcgg                                                                                                                                                                                                                           >  2:807589‑M2/1‑169 (MQ=255)                                                                      ccAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgtaggagcggc                                                                                                                                                                                                                          <  1:625143‑M2/164‑12 (MQ=255)                                                                       cAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTTAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCcgcg                                                                                                                                                                                                                >  1:40844/1‑173 (MQ=255)                                                                       cAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGcatcagc                                                                                                                                                                                    >  1:342966/1‑199 (MQ=255)                                                                       cAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGATCCTCgtaggagcggcttcagccgcga                                                                                                                                                                                                               <  1:773642‑M2/174‑23 (MQ=255)                                                                                   cTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTaa                                                                                                                                        >  2:610230/1‑233 (MQ=255)                                                                                             ccACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAAccc                                                                                                                                           <  1:1063641/220‑1 (MQ=255)                                                                                                cGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGACAAACGCTGCGCACTg                                                                                                                                                               >  1:90728/1‑197 (MQ=255)                                                                                                cGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGCGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTg                                                                                                                                                >  1:313617/1‑212 (MQ=255)                                                                                                        gaaAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgta                                                                                                                                                                                                                                  <  2:335389‑M2/122‑4 (MQ=255)                                                                                                         aaaGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCcac                                                                                                               <  1:303775/236‑1 (MQ=255)                                                                                                                tggGCTGGCCGATGCTCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGTCCAAACGCTGCGCACTGCCACAGGCCAAg                                                                                                                                                   >  1:159364/1‑193 (MQ=255)                                                                                                                tggGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCcaca                                                                                                              >  1:623201/1‑230 (MQ=255)                                                                                                                   gCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGt                                                                                                     <  1:241076/236‑1 (MQ=255)                                                                                                                     tGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAg                                                                                                                         <  1:856836/214‑1 (MQ=255)                                                                                                                     tGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAg                                                                                                                         >  2:856833/1‑214 (MQ=255)                                                                                                                       gCCGATGCGCTTCGGCCGCTAGAGATCCTGCGCCTGGACCGGCCTCTACGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgtaggagcggcatcagccgcgaaga                                                                                                                                                                                                            >  2:394002‑M2/1‑104 (MQ=255)                                                                                                                          gATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACt                                                                                                <  1:701612/234‑1 (MQ=255)                                                                                                                            tGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTg                                                                                               <  2:464034/233‑1 (MQ=255)                                                                                                                               gcTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCGCCTCCCGGACCAGCACAAGCCTGAATCCCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAggcc                                                                                                                                                                                                        <  2:96378/125‑1 (MQ=255)                                                                                                                                     gCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCcac                                                                                                               <  1:840932/208‑1 (MQ=255)                                                                                                                                                           tACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCcgc                                                                                                                                                                                                                 <  2:140388/88‑1 (MQ=255)                                                                                                                                                           gaCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCGTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTa                                                                                                    <  1:35008/196‑1 (MQ=255)                                                                                                                                                                         cgGCTGATGCCGCTCCTAACGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGGGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCcac                                                                                                               <  1:1082/172‑1 (MQ=255)                                                                                                                                                                               aTGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAAccc                                                                                                                                           <  2:159362/138‑1 (MQ=255)                                                                                                                                                                                  ccGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGc                                                                                                                                                                                                 >  1:327152/1‑81 (MQ=255)                                                                                                                                                                                  ccGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGc                                                                                                                                                                                                 <  2:327149/81‑1 (MQ=255)                                                                                                                                                                                   cGCTACTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAg                                                                                                                         <  2:270778/152‑1 (MQ=255)                                                                                                                                                                                         tACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCgtaggagcggctttagccgcgaagaggccggtacaggcgaaggatctctagcggccgaagcgcatcggccagcccaccactttcttcgcccgtggcctcgcataggtgcgcactttggacgtgctcaaaccc                                                                                                 <  1:729536‑M2/170‑133 (MQ=255)                                                                                                                                                                                         tACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAgg                                                                                                            <  1:1008188/159‑1 (MQ=255)                                                                                                                                                                                         tACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAgg                                                                                                            >  2:1008185/1‑159 (MQ=255)                                                                                                                                                                                                      caAGCCTGAATACCGTGGGGTCCTCgtaggagcggcatcagccgcgaagaggccggtacaggcgaaggatctctagcggccgaagcgcatcggccagcccaccactttcttcgcccgtggcgtcgcataggtgcgcacgttggacgtgctcaaacccctgcgcaccagcgattcggcaatggtcacc                                                                   <  1:148776‑M2/187‑163 (MQ=255)                                                                                                                                                                                                      caAGCCTGAATACCGTGGGGTCCTCgtaggagcggcatcagccgcgaagaggccggtacaggcgaaggatctctagcggccgaagcgcatcggccagcccaccactttcttcgcccg                                                                                                                                         >  1:627048‑M2/1‑25 (MQ=255)                                                                                                                                                                                                      caAGCCTGAATACCGTGGGGTCCTCgtaggagcggcatcagccgcgaagaggccggtacaggcgaaggatctctagcggccgaagcgcatcggccagcccaccactttcttcgcccg                                                                                                                                         <  2:627045‑M2/117‑93 (MQ=255)                                                                                                                                                                                                      caAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGTGTCGCTGGTCGCATCCCCGCCCATTCCACCGCCTGGCCATAATccgc                   <  1:610233/235‑1 (MQ=255)                                                                                                                                                                                                           cTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCAcc                                                                                        >  2:864084/1‑161 (MQ=255)                                                                                                                                                                                                            tGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTg                                                                                               >  2:486390/1‑153 (MQ=255)                                                                                                                                                                                                            tGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGTGTCGCTGGTCGCATCCCCGCCCATTCCACCGCCTGGCCATCATCCgccgcc               >  1:176737/1‑233 (MQ=255)                                                                                                                                                                                                              aaTACCGTGGGGTCCCCGGAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGgtg                                                                 <  1:204134/181‑1 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAAc                                                                                                                                                                                            <  2:176307/50‑1 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAAc                                                                                                                                                                                            >  1:176309/1‑50 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGcatca                                                                                                                                                                                      >  2:687886/1‑56 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGcatca                                                                                                                                                                                      <  1:687889/56‑1 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACt                                                                                                >  2:934/1‑142 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGTGTCGCTGGTCGCATCCCCGCCCATTCCACCGCCTGGCCATAATCCGCCGCCCTTGGCAGCGtct  >  1:988698/1‑236 (MQ=255)                                                                                                                                                                                                                      ggggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGCGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGac                                                                                  >  2:331911/1‑155 (MQ=255)                                                                                                                                                                                                                        ggTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCCAACGCTGCGCACTGCCACAGGCCACGGTGAACCCTAACGCCCCATGCCCCAGGCTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCTGACCCCCGCTCGGTGTCGCTGGTCGCATcc                                                  >  2:105349/1‑186 (MQ=255)                                                                                                                                                                                                                           ccTCGTGGGAGCGGCTTTAGCGGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTgc                                                                                                                                                                     <  2:218081/68‑1 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                    CGGTGGTGGATGGTGTGAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGTGTCGCTGGTCGCATCCCCGCCCATTCCACCGCCTGGCCATAATCCGCCGCCCTTGGCAGCGTCT  >  AE015451/4902675‑4903123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.