Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	486307	486478	172	18 [17]	[17] 18	[apaG]	[apaG]

TCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCCATTGGGAGGGGGGAGGGCCAGC  >  AE015451/486077‑486379                                                                                                                                                                                                                                      |                                                                          tctGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCg                                                                        >  2:1006849/1‑233 (MQ=255)    ggCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCg                                                                        <  2:787331/230‑1 (MQ=255)    ggCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACAt                                                                   <  1:523962/235‑1 (MQ=255)                        tGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTg                                              <  1:1006852/236‑1 (MQ=255)                                 aCCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                                      <  1:660810/235‑1 (MQ=255)                                                            aCCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGcc                        <  1:196871/222‑1 (MQ=255)                                                                cGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGTTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCGGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                                      <  1:577214/204‑1 (MQ=255)                                                                     tCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCCATTGGGAGGGGGGAGGGCCAGc  >  1:638517/1‑235 (MQ=255)                                                                         cggtGGTGATCAGCCAGTGGCGCGACAGCAACTGGGCAGTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAg                                                              <  2:116822/168‑1 (MQ=255)                                                                                         gTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACAt                                                                   <  2:405783/150‑1 (MQ=255)                                                                                            gcgcGACAGCAACTTGGCACTGATCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                                      <  1:1029270/176‑1 (MQ=255)                                                                                                                     gagcCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCaata                                      <  1:118871/151‑1 (MQ=255)                                                                                                                        ccGTGGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGc                         <  2:723049/161‑1 (MQ=255)                                                                                                                         cGTTGTTCTGCACGGTACTGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCggggg                                                                           <  2:718425/110‑1 (MQ=255)                                                                                                                                                  ggCGAAAGCGAATCGCCTGTTTTCGGGGGCGGATTGTTCTTTCAGGTAGCGGGTCACGCGGCTGACGTCGGTTTGATAGGGGGGGTCGGCCAGGCAAGGGCCTTGGGAGAAATGAGGCAATAATGCCGTCTAGGCCATTgggaggggg            <  2:638514/148‑1 (MQ=255)                                                                                                                                                   gCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAAc                                                >  1:739433/1‑111 (MQ=255)                                                                                                                                                   gCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAAc                                                <  2:739430/111‑1 (MQ=255)                                                                                                                                                            aagcgaCTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCCATTgg                   <  2:479331/131‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                          TCTGGCCAGGGTCGATGTTGGGTTGCTGGCCGACCACGCCGGCGCCGCGTACTTCCTCTACCTCGCCGTCACCGTTGGTGATCAGCCAGTGGCGCGACAGCAACTTGGCACTGAGCGAGCCGTTGTTCTGCACGGTAATGGTGTAGGCGAAAGCGAAGCGACTGTTTTCGGGGTCGGATTGTTCTTTCAGGTAGCGGGTCACGACGCTGACGTCGATTTGATAGCGGGGGTCGGACATGCAAGGGCCTTGGGCGAACTGACGCAATAATGCAGTCTAGGCCATTGGGAGGGGGGAGGGCCAGC  >  AE015451/486077‑486379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑