| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 212746 = | 36 (0.900) | 3 (0.080) | 3/326 | NT | 8.0% | coding (18252/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | AE015451 | 212769 = | 34 (0.880) | coding (18275/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/212875‑212746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgCGCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGAGCTGGGCGGTGCCGCGAAG > AE015451/212769‑212881 GGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGCGCAGGGTGATGACGTCTACAACGACGCTGGCC < 1:671775/163‑1GGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGCGCAGGGTGATGACGTCTACAACGACGCTGGCC > 2:671774/1‑163 GTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTGCGCAGGGGGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAAACTGGCCCTGGGGGGGGCCGCGAAG > 1:131618/1‑150 TGCGCAGGGTGATGACGTCTACAACGACGCTGGCCAGAT > 2:493301/1‑39 GGCACCGCCCAGCTCCAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCGTCGTTGTAGACGTCATCACCCTGCGCAGCGTGGGTGTACGGCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/212875‑212746‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgCGCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGACGCCACTGGTGCGACCTTCGAGAACCTGGAGCTGGGCGGTGCCGCGAAG > AE015451/212769‑212881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |