| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 489452 = | 49 (1.230) | 6 (0.160) | 6/320 | NT | 12.2% | coding (166/1320 nt) | surA | peptidyl‑prolyl cis‑trans isomerase |
| ? | AE015451 | 489481 = | 40 (1.050) | coding (137/1320 nt) | surA | peptidyl‑prolyl cis‑trans isomerase | |||||
TGAAAGGCCTCGGCGGCGTAGTTGGCAACAAGGTCGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGTCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/489692‑489452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccagcTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGCCGCCGAGGCCTTTCAGGA > AE015451/489481‑489695 TGAAAGGCCTCGGCGGCGTAGTTGGCAACAAGGTCGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGT > 1:261761/1‑236TGAAAGGCCTCGGCGGCGTAGTTGGCAACAAGGTCGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGT > 1:43655/1‑236TGAAAGGCCTCGGCGGCGTAGTTGGCAACAAGGTCGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAAAGACGTGGTCATGCAAAGCCAGCGGGACCAGCGAGTCCATGAGGT > 1:235792/1‑236 CGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGTa > 2:357489/1‑202 ACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGA > 1:698269/1‑213 ACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGA < 2:698268/213‑1 CAGCTGGACCAGCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGCCGCCGAGG > 1:439452/1‑236 AGCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGCCGCCGAGGCCTTTCAGGA > 1:384344/1‑236 GCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCC < 1:573864/97‑1 GCGTGTCCATGAGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCC > 2:573863/1‑97 TGAAAGGCCTCGGCGGCGTAGTTGGCAACAAGGTCGAGTCTTTCCTCGACCAAGGCATTCAAGGTTACCGTGAACGTGAAGACCAAGCTTATTGATCGTCTGCGCCCAGTGTTGCTGGGCGTCGCTTTGCTGAGTGGCGCGGTGCATGCCGCGGTGCAACCTCTTGATCGCGTGGTGGCTATCGTCGACAACGACGTGGTCATGCAAAGCCAGCTGGACCAGCGTGTCCATGAGGTCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/489692‑489452‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtccagcTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGCCGCCGAGGCCTTTCAGGA > AE015451/489481‑489695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |