New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	489452 =	49 (1.230)	6 (0.160)	6/320	NT	12.2%	coding (166/1320 nt)	surA	peptidyl‑prolyl cis‑trans isomerase
	?	AE015451	489481 =	40 (1.050)					coding (137/1320 nt)	surA	peptidyl‑prolyl cis‑trans isomerase

AGCGTCGTCGAACGACAGGCCGTCACGGGCCAGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGC  >  AE015451/489219‑489677                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                  aGCGTCGTCGAACGACAGGCCGTCACGGGCCAGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGc                                                                                                                                                                                                                                  <  1:401768/235‑1 (MQ=255)                   tcctgaaaggcctcggcggcgtagttggcaacaaggtcgagtctttcctcgaccaaggcattcaaggttaccgtgaacgtgaagaccaagcttattgatcgtctgcgcccagtgttgctgggcgtcgctttgctgagtggcgcggtgcatgccgcggtgcaacctcttgatcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGCt                                                                                                                                                                                                               >  1:384344‑M1/216‑236 (MQ=255)                     cGTCACGGGCCAGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGa                                                                                                                                                                                                                     >  2:346500/1‑228 (MQ=255)                             gCCAGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTg                                                                                                                                                                                                     <  1:543056/236‑1 (MQ=255)                             cctcggcggcgtagttggcaacaaggtcgagtctttcctcgaccaaggcattcaaggttaccgtgaacgtgaagaccaagcttattgatcgtctgcgcccagtgttgctgggcgtcgctttgctgagtggcgcggtgcatgccgcggtgcaacctcttgatcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGCTGGTCCAGCTg                                                                                                                                                                                                     >  1:439452‑M1/206‑236 (MQ=255)                                aGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCt                                                                                                                                                                                                      <  2:544844/232‑1 (MQ=255)                                          ggAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGc                                                                                                                                                                                                                                  <  2:751195/194‑1 (MQ=255)                                                         aCATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCt                                                                                                                                                                                                                           >  2:577358/1‑186 (MQ=255)                                                           aTGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGc                                                                                                                                                                                                                                  <  2:195095/177‑1 (MQ=255)                                                                   gcgcTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGccacc                                                                                                                                                                <  1:468230/235‑1 (MQ=255)                                                                        gggCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGACGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGa                                                                                                                                                          <  1:260006/236‑1 (MQ=255)                                                                            aaTGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATg                                                                                                                                                                                                                       >  2:237187/1‑171 (MQ=255)                                                                            aaTGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCAcgt                                                                                                                                                                                    >  1:32757/1‑206 (MQ=255)                                                                                gTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCt                                                                                                                                                                                                      <  2:102350/184‑1 (MQ=255)                                                                                 tGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTg                                                                                                                                                                                                                                   <  1:207223/154‑1 (MQ=255)                                                                                 tGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCAt                                                                                                                                                                                                                        >  1:202643/1‑165 (MQ=255)                                                                                    cAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGc                                                                                                                                              <  1:731003/236‑1 (MQ=255)                                                                                      aTGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCTGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGt                                                                                                                                                                                                            >  2:686099/1‑172 (MQ=255)                                                                                      aTGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCa                                                                                                                                             >  1:21898/1‑235 (MQ=255)                                                                                                 cAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAgg                                                                                                                                                  >  1:609275/1‑219 (MQ=255)                                                                                                    ctctGCGTCGGTGAGGCGGATCCGAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGaca                                                                                                                                                                                                                   <  2:173783/151‑1 (MQ=255)                                                                                                     tctTCGTCGGTCATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCAcc                                                                                                                               <  1:298291/234‑1 (MQ=255)                                                                                                            cgGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCAc                                                                                                                        >  2:718008/1‑234 (MQ=255)                                                                                                                       aTACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGAc                                                                                                           <  1:331678/236‑1 (MQ=255)                                                                                                                         gccAGAGCGCTCGCCGATCTGCAGCTGCAGGTGCTCGGCGATCAGGCGTTCCAGGACCGGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGc                                                                                                                                                                                                                <  2:60288/132‑1 (MQ=255)                                                                                                                            agagCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGccc                                                                                                       >  1:111805/1‑235 (MQ=255)                                                                                                                            agagCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGccc                                                                                                       >  1:83634/1‑235 (MQ=255)                                                                                                                                 gcTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCaa                                                                                                  >  1:634064/1‑235 (MQ=255)                                                                                                                                  cTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCa                                                                                                   <  2:634063/233‑1 (MQ=255)                                                                                                                                      ccGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTgg                                                                                            >  1:164578/1‑236 (MQ=255)                                                                                                                                        gATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGTTCGGCGGCACGCCGCCGCAGCGCTTGCCGATGGTTTGCTGGAACTCATGGACACGCTGGTCCAGCTGGCTTTGCATg                                                                                                                                                                                           >  2:433861/1‑139 (MQ=255)                                                                                                                                        gATCTGCAGCTGCAGATTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTg                                                                                                                                                                                                                                   <  2:27520/99‑1 (MQ=255)                                                                                                                                         aTCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGgc                                                                                          <  1:577359/235‑1 (MQ=255)                                                                                                                                             gcagctgcagGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGa                                                                                     >  1:82158/1‑236 (MQ=255)                                                                                                                                                       gTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGAt                                                                                 >  1:697054/1‑230 (MQ=255)                                                                                                                                                       gTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGAt                                                                                 <  2:697053/230‑1 (MQ=255)                                                                                                                                                             ggcgcggtgcatgccgcggtgcaacctcttgatcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGc                                                                                                                                                                                                                <  1:573864‑M1/20‑1 (MQ=255)                                                                                                                                                             ggcgcggtgcatgccgcggtgcaacctcttgatcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGc                                                                                                                                                                                                                >  2:573863‑M1/78‑97 (MQ=255)                                                                                                                                                                    aGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAg                                                                                                     >  1:233529/1‑197 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGc                                                                                                                                                                                                       <  2:102184/80‑1 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGc                                                                                                                                                                                                       >  1:102184/1‑80 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACcgcg                                                                                                                            >  2:623716/1‑155 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGa                                             >  2:744915/1‑234 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAAt                                           >  1:130511/1‑236 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAAt                                           >  1:296393/1‑236 (MQ=255)                                                                                                                                                                                       gTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCAAGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCCGACg                                                                                   >  2:220752/1‑196 (MQ=255)                                                                                                                                                                                         tCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCtt                                               >  2:76137/1‑230 (MQ=255)                                                                                                                                                                                         tCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATg                                          <  1:383465/235‑1 (MQ=255)                                                                                                                                                                                            ggggCGCTGGTCGGCGGCCCGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGgc                                                                                          <  2:82158/183‑1 (MQ=255)                                                                                                                                                                                             tcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCttcacgt                                                            >  1:698269‑M1/46‑213 (MQ=255)                                                                                                                                                                                             tcgcgtggtggctatcgtcgacaacgacgtggtcatgcaaagccaGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCttcacgt                                                            <  2:698268‑M1/168‑1 (MQ=255)                                                                                                                                                                                                  cTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGac                                                                                                                                                                                                                    <  2:135796/56‑1 (MQ=255)                                                                                                                                                                                                  cTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCa                                                                                                   >  1:257481/1‑169 (MQ=255)                                                                                                                                                                                                     gTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCAcg                                                                                                                                                             >  2:180683/1‑108 (MQ=255)                                                                                                                                                                                                         gcggcACGCCGCCGCCGCGCTTGGCGATGGGTTGCTGGACCTCGTGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGGCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCa                                                                                       <  2:94448/174‑1 (MQ=255)                                                                                                                                                                                                                   gccgccgcGCTTGGCGATGGTTTGCTGGACCTCATGGACGCGCTGGTCCAGCTGGCTTTTCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGgcgc                                                                                        <  2:79127/163‑1 (MQ=255)                                                                                                                                                                                                                       ccgcGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCttc                                                                <  2:382995/183‑1 (MQ=255)                                                                                                                                                                                                                              tGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGt                                                                    <  2:66566/172‑1 (MQ=255)                                                                                                                                                                                                                                gCGATGGGTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTAcgc  <  1:245253/236‑1 (MQ=255)                                                                                                                                                                                                                                  gATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGa                                >  2:49510/1‑204 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                  AGCGTCGTCGAACGACAGGCCGTCACGGGCCAGCGCCGCGCGGAACTGGTCCAGCGACATGCCATTGCGCTGGGCAATGGTGCCAATGGCCTGGTTCAGCTCTTCGTCGGTGATGCGGATACCAGAGCGCTCGCCGATCTGCAGCTGCAGGTTCTCGACGATCAGGCGTTCCAGGACCTGCTGTTCCAGGGCGCTGGTCGGCGGCACGCCGCCGCCGCGCTTGGCGATGGTTTGCTGGACCTCATGGACACGCTGGTCCAGCTGGCTTTGCATGACCACGTCGTTGTCGACGATAGCCACCACGCGATCAAGAGGTTGCACCGCGGCATGCACCGCGCCACTCAGCAAAGCGACGCCCAGCAACACTGGGCGCAGACGATCAATAAGCTTGGTCTTCACGTTCACGGTAACCTTGAATGCCTTGGTCGAGGAAAGACTCGACCTTGTTGCCAACTACGC  >  AE015451/489219‑489677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.