New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 608871 = | 35 (0.880) | 5 (0.130) | 5/322 | NT | 12.6% | coding (742/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB |
? | AE015451 | 608902 = | 36 (0.940) | coding (773/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB |
ACGGCATCGTGGGCCTGCGCGGAAGCTGGGTAGCAAGCCGCGAGCTTACGCTCGACCTGAAGCTGGACAACCTGCTGGGAAAGCAGTACAGCCGCGTCCACTACAACCACCAGGGCAACGACTACGGCTATCGCGAAGAAAGACGCACTTGGCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/609104‑608871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCCGCGCAGGCCCACGATGCCGTAGCCTGCAATGGGGTCACTATTGCCTTCA > AE015451/608902‑609133 ACGGCATCGTGGGCCTGCGCGGAAGCTGGGTAGCAAGCCGCGAGCTTACGCTCGACCTGAAGCTGGACAACCTGCTGGGAAAGCAGTACAGCCGCGTCCACTACAACCACCAGGGCAACGACTACGGCTATCGCGAAGAAAGACGCACTTGGCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCG > 1:359057/1‑232 CGGAAGCTGGGTAGCAAGCCGCGAGCTTACGCTCGACCTGAAGCTGGACAACCTGCTGGGAAAGCAGTACAGCCGCGTCCACTACAACCACCAGGGCAACGACTACGGCTATCGCGAAGAAAGACGCACTTGGCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCTTGTGTGCGTTGCTGGACGCTA > 1:250918/1‑236 CCGCGAGCTTACGCTCGAACAGAAGCTGGACAACCTGCTGGGAAAGCAGTACAGCCGCGTCCACTACAACCACCAGGGCAACGACTACGGCTATCGCGAAGAAAGACGCACTTGGCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGG < 1:122398/235‑1 CGACTACGGCTAGCGCGAAGAAAGACGCGCTTGTCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCACCGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCTTGTGTGCGTTGCTGGACGCTAAAGCG < 2:250917/142‑1 GCACTTGGCTCTTGAGCATCACCTGGACACCGTCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCTTGTGTGCTATGCTGGACGCTAAAGCGCCGGTGTCCAGGTGAT < 2:306116/132‑1 CATCGCCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGG < 1:654322/180‑1 CCCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCC < 1:622076/189‑1 CCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCCG > 2:493596/1‑189 CCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGC > 1:470908/1‑159 CCGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGC < 2:470907/159‑1 CGCTTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCCGCGCAGGCCCACGATGCCGTAGCCTGCAATGGGGTCACTATTGCCTTCA > 1:419514/1‑236 GCTTGTGTGCGTTGCTGGACGCTAACGCGCCGGTGTGCAGGTCAGGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAG < 2:645714/85‑1 TTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCCGCGCAGGCCCACG < 1:220334/197‑1 ACGGCATCGTGGGCCTGCGCGGAAGCTGGGTAGCAAGCCGCGAGCTTACGCTCGACCTGAAGCTGGACAACCTGCTGGGAAAGCAGTACAGCCGCGTCCACTACAACCACCAGGGCAACGACTACGGCTATCGCGAAGAAAGACGCACTTGGCTCTTGAGCATCACCTGGACACCGGCGCTTTAGCGTCCAGCAACGCACACAAGCGGGCGGTGGCTTCGATCATCTGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/609104‑608871 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctTGTGTGCGTTGCTGGACGCTAAAGCGCCGGTGTCCAGGTGATGCTCAAGAGCCAAGTGCGTCTTTCTTCGCGATAGCCGTAGTCGTTGCCCTGGTGGTTGTAGTGGACGCGGCTGTACTGCTTTCCCAGCAGGTTGTCCAGCTTCAGGTCGAGCGTAAGCTCGCGGCTTGCTACCCAGCTTCCGCGCAGGCCCACGATGCCGTAGCCTGCAATGGGGTCACTATTGCCTTCA > AE015451/608902‑609133 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |