New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	923641 =	33 (0.830)	3 (0.090)	3/296	NT	9.7%	coding (1552/2169 nt)	PP_0804	Protein secretion ABC efflux system, permease and ATP‑binding protein
	?	AE015451	923661 =	27 (0.770)					coding (1532/2169 nt)	PP_0804	Protein secretion ABC efflux system, permease and ATP‑binding protein

TTCATCGCGAATGATGGCGCCGTTGGCCCAACTGACCCATGTGCTGACCCGCTGGCAGCAGGCCAAGGTCGCGCTGCAAGGCCTGGACAAGCTGATGCAGTCGCCGGTCGATCACCCCGAAGGCGAAGCCCGCGTGCACCTGCCGGCCATTCACGGCGAGTACCGCCTGCGCCAGGCCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATCCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/923882‑923641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctggatatccagccggCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGA  >  AE015451/923661‑923732                                                                                                                                                                                                                                                                                                                            TTCATCGCGAATGATGGCGCCGTTGGCCCAACTGACCCATGTGCTGACCCGCTGGCAGCAGGCCAAGGTCGCGCTGCAAGGCCTGGACAAGCTGATGCAGTCGCCGGTCGATCACCCCGAAGGCGAAGCCCGCGTGCACCTGCCGGCCATTCACGGCGAGTACCGCCTGCGCCAGGCCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATC                                                                                 <  1:542112/235‑1                                                            AGGCCAAGGTCGCGCTGCAAGGCCTGGACAAGCTGATGCAGTCGCCGGTCGATCACCCCGAAGGCGAAGCCCGCGTGCACCTGCCGGCCATTCACGGCGAGTACCGCCTGCGCCAGGCCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATCCAGCCG                                                                           <  2:607017/182‑1                                                                                                                                                                    CGCCTGCGCCAGGCCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCG               >  2:638390/1‑138                                                                                                                                                                                 CCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACT          >  1:560661/1‑130                                                                                                                                                                                                                   GCTGAACATTGGCCGGCTGGATATCCAGCCGGCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGA  >  2:315936/1‑104                                                                                                                                                                                                                                                                                                                            TTCATCGCGAATGATGGCGCCGTTGGCCCAACTGACCCATGTGCTGACCCGCTGGCAGCAGGCCAAGGTCGCGCTGCAAGGCCTGGACAAGCTGATGCAGTCGCCGGTCGATCACCCCGAAGGCGAAGCCCGCGTGCACCTGCCGGCCATTCACGGCGAGTACCGCCTGCGCCAGGCCAACTTCCGCTACAGCGAAGACTACCCGCCAGTGCTGAACATTGGCCGGCTGGATATCCAGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/923882‑923641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggctggatatccagccggCCAATGTTCAGCACTGGCGGGTAGTCTTCGCTGTAGCGGAAGTTGGCCTGGCGCAGGCGGTACTCGCCGTGA  >  AE015451/923661‑923732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.