| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 1473519 | 58 (1.450) | 3 (0.080) | 3/318 | NT | 5.0% | coding (702/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
| ? | AE015451 | = 1473631 | 60 (1.590) | coding (590/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGACATCGAGGCTGGCGGCGCGGTAGGTGAGGGCGCGTACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCATCGACGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1473276‑1473519‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcccCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGTACACCTGCAACGTTTGGCACGCCACCAAGGTCACCTTCGCCAACGAAATCGGCAACATCGCCAAGGCCGTGGGCGTCGATGGCCGCGAAGTGATGGACGTGGTCTGCCAGGACAAGGTCCTCAACCTGTCCCAGTACTACATGCGCCCTGGCTTTGCCTTCGGCGGCTCTTGCTTGCCCAAGGACGT < AE015451/1473631‑1473403 CTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGACATCGAGGCTGGCGGCGCGGTAGGTGAGGGCGCGTACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCAT < 1:129255/236‑1CTTGCGCTGGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGACATCGAGGCTGGCGGCGCGGTAGGTGAGGGCGCGTACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCAT < 1:103556/236‑1 ATCAGCTCGAAGGCGTTCTGCACCTGCGCTTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGACATCGAGGCTGGCGGCGCGGTAGGTGAGGGCGCGTACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCATCGACG < 1:157605/219‑1 ACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCATCGACGCCCCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGTACACC < 2:572006/164‑1 CTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCATCGACGCCCCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGTACACCTGCAACGTTTGGCACGCCACCAAGGTCACCTTCGCCAACGAAATCGGCAACATCGCCAAGGCCGTGGGCGT < 2:623111/230‑1 ACGTCCATCCCTTCGCGGCCATCGACGCCCCGATCATCCGCAAGCCGATCGCAGTGGCCGAAATGATCAAGTACACCTGCAACGTTc > 2:497385/1‑86 GACGCCCCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGTACACCTGCAACGTTTGGCACGCCACCAAGGTCACCTTCGCCAACGAAATCGGCAACATCGCCAAGGCCGTGGGCGTCGATGGCCGCGAAGTGATGGACGTGGTCTGCCAGGACAAGGTCCTCAACCTGTCCCAGTACTACATGCGCCCTGGCTTTGCCTTCGGCGGCTCTTGCTTGCCCAAGGACGT < 1:725993/236‑1 CCCCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGCACACCTGCAACGTTTGGCACGCCACCAAGGTCACCTTCGCCAACGAAATCGGCAACATCGCCAAGGCCGTGGGCGTCGATGGCCGCGAAGTGATGGACGTGGTCTGCCAGGACAAGGTCCTCA < 2:485011/168‑1 CTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGACATCGAGGCTGGCGGCGCGGTAGGTGAGGGCGCGTACGTCCTTGGGCAAGCAAGAGCCGCCGAAGGCAAAGCCAGGGCGCATGTAGTACTGGGACAGGTTGAGGACCTTGTCCTGGCAGACCACGTCCATCACTTCGCGGCCATCGACGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1473276‑1473519‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacgcccCGATCATCCGCAAGCCGATCGAAGTGGCCGAAATGATCAAGTACACCTGCAACGTTTGGCACGCCACCAAGGTCACCTTCGCCAACGAAATCGGCAACATCGCCAAGGCCGTGGGCGTCGATGGCCGCGAAGTGATGGACGTGGTCTGCCAGGACAAGGTCCTCAACCTGTCCCAGTACTACATGCGCCCTGGCTTTGCCTTCGGCGGCTCTTGCTTGCCCAAGGACGT < AE015451/1473631‑1473403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |