New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1594248	32 (0.800)	4 (0.110)	3/320	NT	11.0%	coding (1175/1320 nt)	kgtP	Alpha‑ketoglutarate permease
	?	AE015451	= 1594250	34 (0.890)					coding (1173/1320 nt)	kgtP	Alpha‑ketoglutarate permease

GTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1594026‑1594248 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAAC  <  AE015451/1594250‑1594102                                                                                                                                                                                                                                                                                                                                                                                      GTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATT                                                                                                                                                             >  1:587414/1‑217    AAGAAGGAAAAGTCTGAATAGAAAATGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCTTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCG                                                                                                                                                        <  1:14061/219‑1                     ATAGAAAAGGAGCGCTCCATGCAATGGGGCGCCCCTGTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCG                                                                                                                                                        <  2:210946/202‑1                                      CATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCG                                                                                                                                                        <  1:743577/185‑1                                      CATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCG                                                                                                                                                        >  2:743576/1‑185                                                                    CAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTC                                                                                                                                                            >  2:458295/1‑151                                                                                                                                                                         TAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACC            >  2:615933/1‑194                                                                                                                                                                                      CCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAG                                                                                                       >  2:608096/1‑90                                                                                                                                                                                                  TCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACC                                             >  1:327440/1‑136                                                                                                                                                                                                  TCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGAGCCGGGATGGAGAGCGGCTTCTACTGGCACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACAACTGAGTAAC  >  2:244003/1‑179                                                                                                                                                                                                                              GGCACCGCCG‑ATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCT                                                                    >  1:353995/1‑84                                                                                                                                                                                                                              GGCACCGCCG‑ATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCT                                                                    <  2:353994/84‑1                                                                                                                                                                                                                                                                                                                                                                                      GTTAAGAAGGAAAAGTCTGAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1594026‑1594248 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAAC  <  AE015451/1594250‑1594102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.