New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1964713	37 (0.930)	3 (0.080)	3/322	NT	7.7%	coding (925/2526 nt)	yegE	diguanylate cyclase with phosphodiesterase domain
	?	AE015451	= 1964714	36 (0.940)					coding (926/2526 nt)	yegE	diguanylate cyclase with phosphodiesterase domain

GCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1964651‑1964713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcccTGGGCCTGGCCGGATTGCCAGTGGGTCAACTGCTCGGCGGCCGGGTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCAATG  <  AE015451/1964714‑1964517                                                                                                                                                                                                                                                                       GCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCTGGGCCTGGCCGGATTGCCAGTGGGTCAACTGCTCGGCGGCCGGGTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAG                                               <  1:306684/216‑1              CATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCTGGGCCTGGCCGGATTGCCAGTGGGTCAACTGCTCGGCGGCCGGGTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGC                                                                                 >  2:306683/1‑169                           GCCGAGCAGTTGACCCACTGGCAATCCGG‑CAGGCCCTGGGCCTGGCCGGATTGCCAGTGGGTCAACTGCTCGGCGGCCGGGTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCAATG  >  2:453247/1‑234                                                                                                                                                                                                                                                                       GCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1964651‑1964713 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcccTGGGCCTGGCCGGATTGCCAGTGGGTCAACTGCTCGGCGGCCGGGTTCATGTAGCCGATATTGCCCTCGACATCGGTTGTAATCACCGCATCCCCGATGGCCTGCAGGGTAATCTGCGCACGCTCTTTTTCTTCCTGCAGGGCGCTGGCAAAGGCCTGGCGCTGGGCCAACAGCTTGCTGGAGCGGCGCCAGGCAATG  <  AE015451/1964714‑1964517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.