New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1964713 | 37 (0.930) | 3 (0.080) | 3/322 | NT | 7.7% | coding (925/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain |
? | AE015451 | = 1964714 | 36 (0.940) | coding (926/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain |
CATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTG > AE015451/1964517‑1964925 | cATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAgggcctgccggattgccagtgggtcaactgctcggc > 2:453247‑M2/1‑198 (MQ=255) gCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCATGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCa < 2:678281/194‑1 (MQ=255) gccgcTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCgag > 1:553765/1‑236 (MQ=255) cAGCAAGCGGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGACCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCGACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGTCCTGCCGCTATCgg > 2:710118/1‑197 (MQ=255) aGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCa > 2:81459/1‑157 (MQ=255) aGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGt > 1:203305/1‑235 (MQ=255) cTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAgggcctggccggattgccagtgggtcaactgctcggcggccgggttcatgtagccgatattgc < 1:306684‑M2/216‑64 (MQ=255) aGCGCCCTGCAGGAAGAAGAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAg < 1:493555/219‑1 (MQ=255) gCGTGCGCAGATTCCCCTGCAGGCCATCGGGGATGCGGTGATTACACCCGATGTCGAGGGCAATGTCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCCCTGGCAATCCGGCCAGGCCCAGGGCCTGCCGc < 1:251274/134‑1 (MQ=255) gcgcAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAgggcctggccggattgccagtgggtcaactgctcggcggccgggttcatg > 2:306683‑M2/1‑119 (MQ=255) gcgcAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCGCCGAGCATGc > 2:579067/1‑233 (MQ=255) aTTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCa < 2:332265/224‑1 (MQ=255) ccTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCgagga < 1:318635/159‑1 (MQ=255) gCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCg < 2:6877/117‑1 (MQ=255) gCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCg > 1:6877/1‑117 (MQ=255) gCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTg > 1:398930/1‑180 (MQ=255) gcATCGGGGATGCGGGGATTACAACCGATGTCGGGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCACTCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGCTGAGCACGCCgcggag > 2:539823/2‑152 (MQ=255) ccATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCCCTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATg > 2:194612/1‑156 (MQ=255) ccATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTg > 2:630984/1‑233 (MQ=255) ccATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGAc > 1:140481/1‑236 (MQ=255) aTCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTg > 1:7012/1‑177 (MQ=255) cGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGAt > 1:557109/1‑133 (MQ=255) cGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGAt < 2:557108/133‑1 (MQ=255) tACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATTCAGCGCCTGGACGGCAGTACCGTGTc < 1:525128/231‑1 (MQ=255) aaCCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCAGTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGc < 2:552540/163‑1 (MQ=255) tCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAgg > 1:6173/1‑235 (MQ=255) tCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAg > 2:666274/1‑234 (MQ=255) gAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGc > 2:398824/1‑178 (MQ=255) gCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCtgggcctggccggattgccagtgggtcaactgctcggcggccgggttcatgtagccgatattgccctcgacatcggttgtaatcaccgcatccccgatggcctgcagggtaatctgcgcacgctctttttcttcctgcagggcgctggcaaag < 1:306684‑M1/216‑154 (MQ=255) atatCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAg < 2:277306/124‑1 (MQ=255) cctccATGACCCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAgcgc < 2:203305/181‑1 (MQ=255) cATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCtgggcctggccggattgccagtgggtcaactgctcggcggccgggttcatgtagccgatattgccctcgacatcggttgtaatcaccgcatccccgatggcctgcagggtaatctgcgc > 2:306683‑M1/1‑50 (MQ=255) ccGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGt < 1:449909/236‑1 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATgg > 2:276906/1‑224 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAg < 1:718836/233‑1 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAg > 2:718835/1‑233 (MQ=255) gccgAGCAGTTGACCCACTGGCAATCCGG‑CAGGCCCtgggcctggccggattgccagtgggtcaactgctcggcggccgggttcatgtagccgatattgccctcgacatcggttgtaatcaccgcatccccgatggcctgcagggtaatctgcgcacgctctttttcttcctgcagggcgctggcaaaggcctggcgctgggccaacagcttgctggagcggcgccaggcaatg > 2:453247‑M1/1‑36 (MQ=255) cAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCg < 1:630985/235‑1 (MQ=255) cccACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGtg < 1:59489/236‑1 (MQ=255) gCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAgcgc < 2:628793/148‑1 (MQ=255) gCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCgct > 2:717732/1‑169 (MQ=255) cAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTc < 1:78047/122‑1 (MQ=255) cAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTc > 2:78047/1‑122 (MQ=255) cGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTg < 2:140481/209‑1 (MQ=255) cAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAatgat < 2:498356/192‑1 (MQ=255) ccAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCa > 2:704921/1‑182 (MQ=255) | CATTGCCTGGCGCCGCTCCAGCAAGCTGTTGGCCCAGCGCCAGGCCTTTGCCAGCGCCCTGCAGGAAGAAAAAGAGCGTGCGCAGATTACCCTGCAGGCCATCGGGGATGCGGTGATTACAACCGATGTCGAGGGCAATATCGGCTACATGAACCCGGCCGCCGAGCAGTTGACCCACTGGCAATCCGGCCAGGCCCAGGGCCTGCCGCTGTCGGCACTGTTCAGCCTGGTGGATGAGCACGCCGAGGAGGATGGTCGCAGCTTGGTCGAGCAGGTGCTCAGCGGCAGCCTCAAGGGCGGCTCCGAGCATGCCCGGCTGATCCAGCGCCTGGACGGCAGTACCGTGTCGATCAACCTGGTAGGCTCGCCGATCCTCAATGATGGCCAGGTCAGTGGCATCGTACTGGTG > AE015451/1964517‑1964925 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |