New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2386077 =	33 (0.830)	3 (0.080)	3/318	NT	7.8%	coding (1027/1215 nt)	PP_2094	putative Nitrate‑binding protein NasS
	?	AE015451	2386182 =	40 (1.060)					coding (922/1215 nt)	PP_2094	putative Nitrate‑binding protein NasS

CGCAAGCGCTTACCTGGACACCCCGCTGGACAGCATAGCCCCCCGCCTGCTCGGCCATTATGAGGATGGCCTGGGCAACCAGTGGCAAGACCCACACGCCCTGCGCCTGTTCGACCAAGGCCGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2386300‑2386077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccggcCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTGCTCGATGAATCGGCTGGCGGTGAGGATCGCCTTGATCAGCGCACGGGCGCTGTTGGGGTATTGCTCGGC  >  AE015451/2386182‑2386410                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCAAGCGCTTACCTGGACACCCCGCTGGACAGCATAGCCCCCCGCCTGCTCGGCCATTATGAGGATGGCCTGGGCAACCAGTGGCAAGACCCACACGCCCTGCGCCTGTTCGACCAAGGCCGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCC                                                                                                                                                                                                                                          <  1:299591/221‑1                                      GCCCCCCGCCTGCTCGGCCATTATGAGGATGGCCTGGGCAACCAGTGGCAAGACCCACACGCCCTGCGCCTGTTCGACCAAGGCCGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCC                                                                                                                                                                                                                                           <  1:126325/183‑1                                                TGCTCGGCCATTATGAGGATGGCCTGGGCAACCAGTGGCAAGACCCACACGCCCTGCGCCTGTTCGACCAAGGCCGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGCCTTGG                                                                                                                                                                                                                                  <  1:21788/182‑1                                                                                                                         CCGGGCCACCCTGCCCTCCCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGCCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCG                                                                                                   <  1:178356/236‑1                                                                                                                          CGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGCCTTGGTCGAACAGGCGCAGGGCGTGGGGGg                                                                                                                                                                                                         >  2:178356/1‑132                                                                                                                                                                             CGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGCCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTGCTCGATGA                                                               >  1:443869/1‑220                                                                                                                                                                                                                          GCCCGGCCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTG                                                                       <  1:460823/167‑1                                                                                                                                                                                                                          GCCCGGCCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTG                                                                       >  2:460822/1‑167                                                                                                                                                                                                                          GCCCGGCCGTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTGCTCGATGAATCGGCTGGCGGTGAGGATCGCCTTGATCAGCGCACGGGCGCTGTTGGGGTATTGCTCGGC  <  1:329686/236‑1                                                                                                                                                                                                                             CGGCCGTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCGCAGGCCAGCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGG                                                                                                                                      <  2:66230/101‑1                                                                                                                                                                                                                              GGCCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAG                                                                                                                                                                                      <  1:342083/52‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCAAGCGCTTACCTGGACACCCCGCTGGACAGCATAGCCCCCCGCCTGCTCGGCCATTATGAGGATGGCCTGGGCAACCAGTGGCAAGACCCACACGCCCTGCGCCTGTTCGACCAAGGCCGGGCCAACCTGCCCTACCTGTCCGACGGTATGTGGTTCATGACCCAGTTCCGCCGCTGGGGCCTGCTGCGCGAAGACCCCGACTACCTCGGCGTGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2386300‑2386077 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcccggcCTTGGTCGAACAGGCGCAGGGCGTGTGGGTCTTGCCACTGGTTGCCCAGGCCATCCTCATAATGGCCGAGCAGGCGGGGGGCTATGCTGTCCAGCGGGGTGTCCAGGTAAGCGCTTGCGCTGAGCAGTTGCGCGGTGCTGCGGCGGTTTTCCGGGCTTTGCTCGATGAATCGGCTGGCGGTGAGGATCGCCTTGATCAGCGCACGGGCGCTGTTGGGGTATTGCTCGGC  >  AE015451/2386182‑2386410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.