New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2468748 =	32 (0.800)	3 (0.080)	3/326	NT	9.2%	coding (175/564 nt)	PP_2162	putative phosphonoacetaldehyde phosphonohydrolase‑related protein
	?	AE015451	2468891 =	28 (0.720)					coding (32/564 nt)	PP_2162	putative phosphonoacetaldehyde phosphonohydrolase‑related protein

GCGATGTCACAGGACGGTAACAATCAACGCATAGCCTTCGAACCATTTGGGGGAAGTTGCCATGGACACTGCGCCCGCCTTCACTGCTGTACTGTTCGGTTTGCGCGGCTGCCTGGTGCAGGCTACCCATGGCGCACCATCACCCGCCCCCGGCGCCCTGGGCACCCTTGCCAGCCTGCGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAAGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2468983‑2468748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacAGTACAGCAGTGAAGGCGGGCGCAGTGTCCATGGCAACTTCCCCCAAATGGTTCGAAGGCTATGCGTTGATTGTTACCGTCCTGTGACATC  >  AE015451/2468891‑2468981                                                                                                                                                                                                                                                                                                                                         GCGATGTCACAGGACGGTAACAATCAACGCATAGCCTTCGAACCATTTGGGGGAAGTTGCCATGGACACTGCGCCCGCCTTCACTGCTGTACTGTTCGGTTTGCGCGGCTGCCTGGTGCAGGCTACCCATGGCGCACCATCACCCGCCCCCGGCGCCCTGGGCACCCTTGCCAGCCTGCGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAAGCGAAC                                                                                             >  1:110153/1‑236                                                                                                                          GCTACCCATGGCGCACCATCACCCGCCCCCGGCGCCCTGGGCACCCTTGCCAGCCTGCGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAACCGAACAGTACAGCAGTGAAGGCGGACGCAGGGTCCATGGC                                                          >  2:448243/1‑150                                                                                                                                                                                   CGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAAGCGAACAGTACAGCAGTGAAGGCGGGCGCAGTGTCCATGGCAACTTCCCCCAAATGGTTCGAAGGCTATGCGTTGATTGTTACCGTCCTGTGACATC  <  1:600302/149‑1                                                                                                                                                                                   CGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAAGCGAACAGTACAGCAGTGAAGGCGGGCGCAGTGTCCATGGCAACTTCCCCCAAATGGTTCGAAGGCTATGCGTTGATTGTTACCGTCCTGTGACATC  >  2:600301/1‑149                                                                                                                                                                                                                                                                                                                                         GCGATGTCACAGGACGGTAACAATCAACGCATAGCCTTCGAACCATTTGGGGGAAGTTGCCATGGACACTGCGCCCGCCTTCACTGCTGTACTGTTCGGTTTGCGCGGCTGCCTGGTGCAGGCTACCCATGGCGCACCATCACCCGCCCCCGGCGCCCTGGGCACCCTTGCCAGCCTGCGTCAGCGCCAAGTGCCGTGCATTTGGTTGGATGACCTCAATACCGCGCAAAGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2468983‑2468748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaacAGTACAGCAGTGAAGGCGGGCGCAGTGTCCATGGCAACTTCCCCCAAATGGTTCGAAGGCTATGCGTTGATTGTTACCGTCCTGTGACATC  >  AE015451/2468891‑2468981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.