New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4653677	41 (1.030)	3 (0.080)	3/316	NT	6.6%	coding (155/1326 nt)	aceA	isocitrate lyase
	?	AE015451	= 4653754	46 (1.220)					coding (232/1326 nt)	aceA	isocitrate lyase

TGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4653469‑4653677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagggcgcCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCACGGAGCCACGCAGGCGAACGACATCAGCGGCGGTGTAGGTACGGGTCACGCCTTTCCAGC  <  AE015451/4653754‑4653584                                                                                                                                                                                                                                                                                                                                                                                              TGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCA                                                                                                                                                                                   <  1:410970/203‑1                   AATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGG                                                                                                                                                                                <  1:659270/188‑1                                      CGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGC                                                                                                                                                                               >  2:289810/1‑170                                                                                                                                               CCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTGTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCAGGGAGC                                                        >  1:327530/1‑184                                                                                                                                                 GCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCACGGAGCCACGCAGGCGAACGACATCAGCGGCGGTGTAGGTACGGGTCACGCCTTTCCAGC  >  1:55313/1‑236                                                                                                                                                     CTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCGGCGCCCTGACG                                                                                     >  1:683424/1‑149                                                                                                                                                                                                   TGCGCGTCAGGGCGCCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCACGGAGCCACGCAGGCGAACGACATCAG                                   >  1:617320/1‑153                                                                                                                                                                                                   TGCGCGTCAGGGCGCCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCACGGAGCCACGCAGGCGAACGACATCAG                                   <  2:617319/153‑1                                                                                                                                                                                                                                                                                                                                                                                              TGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4653469‑4653677 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagggcgcCCATGCAGTTGACGAAATCTTTGTCGGGGCGGAAGGACGGGTGGGCACCTTCGGTGACCAGCTTCCACAGTTTTTCTGCGCCCTGACGCGCAAAGGTGTGCTCAGGTTGCACGGAGCCACGCAGGCGAACGACATCAGCGGCGGTGTAGGTACGGGTCACGCCTTTCCAGC  <  AE015451/4653754‑4653584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.