New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4653677	41 (1.030)	3 (0.080)	3/316	NT	6.6%	coding (155/1326 nt)	aceA	isocitrate lyase
	?	AE015451	= 4653754	46 (1.220)					coding (232/1326 nt)	aceA	isocitrate lyase

CACCTGATCTGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGTACCCGGTCGACTCGGTACCG  >  AE015451/4653460‑4653900                                                                                                                                                                                                                          |                                                                                                                                                                                                                                cACCTGATCTGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTGCCTAGACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGc                                                                                                                                                                                                                >  1:405669/1‑235 (MQ=255)                                         tCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACaaa                                                                                                                                                                       >  1:146748/1‑236 (MQ=255)                                         tCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACaaa                                                                                                                                                                       <  1:350027/236‑1 (MQ=255)                                          cGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAGCTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTcc                                                                                                                                                                                  <  1:351557/224‑1 (MQ=255)                                               cgacgaGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAgg                                                                                                                                                                                                   >  2:317059/1‑202 (MQ=255)                                               cgacgaGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTc                                                                                                                                                                 >  1:474544/1‑236 (MQ=255)                                                                    cACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAgga                                                                                                                                                                                                                             >  2:609920/1‑153 (MQ=255)                                                                           acGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACcggcg                                                                                                                                     <  1:316460/236‑1 (MQ=255)                                                                             gcgAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACcggcgg                                                                                                                                    <  1:317060/235‑1 (MQ=255)                                                                                 aCAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGCTTTCGTCAACTGCATGGGCGCCCTGACcg                                                                                                                                        >  2:644790/1‑227 (MQ=255)                                                                                                              gggCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAgg                                                                                                                                                                                                   >  1:629533/1‑139 (MQ=255)                                                                                                                  cGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTg                                                                                                                            >  1:490952/1‑206 (MQ=255)                                                                                                                  cGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCa                                                                                              <  1:624281/236‑1 (MQ=255)                                                                                                                         ccGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTac                                                                                                                         <  2:61102/202‑1 (MQ=255)                                                                                                                             gcTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcagcggc                                                                                   >  1:55313‑M2/1‑171 (MQ=255)                                                                                                                              cTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAg                                                                                                                                                                                                                               <  1:228591/95‑1 (MQ=255)                                                                                                                                          gACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTg                                                                              >  1:92802/1‑228 (MQ=255)                                                                                                                                            cccGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAgg                                                                                                                   >  1:474907/1‑189 (MQ=255)                                                                                                                                              cGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCCGGTTgccgc                                                                  >  1:139997/1‑236 (MQ=255)                                                                                                                                                   cTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTgcc                                                                    <  1:243060/229‑1 (MQ=255)                                                                                                                                                     acgccgccgCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCAc                                                                                                                                                                                                         <  2:137502/91‑1 (MQ=255)                                                                                                                                                      ccccgccgCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACcggcgg                                                                                                                                    <  1:236619/160‑1 (MQ=255)                                                                                                                                                       acCGCCGCGGATGTCGGTCGCCTGCGTGGCTCCGTGCAACCTGAGCACGCCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTg                                                                                                                            <  1:143533/169‑1 (MQ=255)                                                                                                                                                        ccgccgCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCccatgcagttgacgaaatctttgtcggggcggaaggacgggtgggcaccttcggtgaccagcttccacagttgttctgcgccctgacgcgcaaaggtgtgctcaggttgcagggagc                                                                                                            >  1:327530‑M1/1‑67 (MQ=255)                                                                                                                                                        ccgccgCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCAt                                                                                                      <  2:601642/190‑1 (MQ=255)                                                                                                                                                          gccgcTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCccatgcagttgacgaaatctttgtcggggcggaaggacgggtgggcaccttcggtgaccagcttccacagtttttctgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcagcggcggtgtaggtacgggtcacgcctttccagc                                                      >  1:55313‑M1/1‑65 (MQ=255)                                                                                                                                                          gccgcTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACCACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACt                                                       >  2:381686/1‑235 (MQ=255)                                                                                                                                                             gcTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGc                                                   >  1:131260/1‑236 (MQ=255)                                                                                                                                                              cTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCccatgcagttgacgaaatctttgtcggggcggaaggacgggtgggcaccttcggtgaccagcttccacagtttttcggcgccctgacg                                                                                                                                         >  1:683424‑M1/1‑61 (MQ=255)                                                                                                                                                              cTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAg                                                                                                                                                                                                                               >  1:609510/1‑63 (MQ=255)                                                                                                                                                              cTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAg                                                                                                                                                                                                                               <  2:609509/63‑1 (MQ=255)                                                                                                                                                              cTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGgcgccctgacgcgca                                                                                                                                     >  1:617320‑M2/1‑138 (MQ=255)                                                                                                                                                              cTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGgcgccctgacgcgca                                                                                                                                     <  2:617319‑M2/153‑16 (MQ=255)                                                                                                                                                               tGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGCCCATCTACCTGTCCGGc                                                                                >  1:566864/1‑205 (MQ=255)                                                                                                                                                                   gTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTc                                             <  1:348451/236‑1 (MQ=255)                                                                                                                                                                    tCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAg                                               >  2:348450/1‑233 (MQ=255)                                                                                                                                                                      gTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACcggcgg                                                                                                                                    <  2:475143/146‑1 (MQ=255)                                                                                                                                                                             tGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCAt                                                                                                      <  1:353465/169‑1 (MQ=255)                                                                                                                                                                                   gCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAg                             <  1:212142/236‑1 (MQ=255)                                                                                                                                                                                   gCTCCCTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAACAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcagcggcgg                                                                                 >  1:327530‑M2/1‑117 (MQ=255)                                                                                                                                                                                       cGTGCAACCTGAGCACACCTTTGCGCGGCAGGGCGCAGAAAAACTGTGGAAGCGGGTCCCCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACcggcgg                                                                                                                                    <  2:35275/129‑1 (MQ=255)                                                                                                                                                                                          gCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGt                      <  1:343564/236‑1 (MQ=255)                                                                                                                                                                                            aaCCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGCCCAGACGCTGGAc                    >  1:186408/1‑236 (MQ=255)                                                                                                                                                                                                    cacaCCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCCCCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGAGTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAg                             <  2:146748/219‑1 (MQ=255)                                                                                                                                                                                                    cacaCCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATAGGCGCCCTGACCGGCGGCCAGGCTGTACAACAAGTCACGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAg                                               >  1:421497/1‑201 (MQ=255)                                                                                                                                                                                                      cacCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGACGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTgcc                                                                    <  1:517794/178‑1 (MQ=255)                                                                                                                                                                                                        ccTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGAcc                               <  2:525730/213‑1 (MQ=255)                                                                                                                                                                                                         cTTTGCGCGTCAGGGCGCAGAACAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCt                                                                               <  2:136744/164‑1 (MQ=255)                                                                                                                                                                                                            tGCGCGTCAGGGCGCccatgcagttgacgaaatctttgtcggggcggaaggacgggtgggcaccttcggtgaccagcttccacagtttttctgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcag                                                                                       >  1:617320‑M1/1‑15 (MQ=255)                                                                                                                                                                                                            tGCGCGTCAGGGCGCccatgcagttgacgaaatctttgtcggggcggaaggacgggtgggcaccttcggtgaccagcttccacagtttttctgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcag                                                                                       <  2:617319‑M1/153‑139 (MQ=255)                                                                                                                                                                                                              cgcgTCAGGGCGCAGAAAAGCTGTAGAAGGTGGTCACCGAAGGTGCGCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCC‑GACcggcgg                                                                                                                                    <  2:384276/105‑1 (MQ=255)                                                                                                                                                                                                              cgcgTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGTACCCGGTCGACTCGGTaccg  <  1:597803/236‑1 (MQ=255)                                                                                                                                                                                                                cgTCAGGGCGCCGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGgcgccctgacgcgcaaaggtgtgctcaggttgcacggagccacgcaggcgaacgacatcag                                                                                       >  1:683424‑M2/1‑88 (MQ=255)                                                                                                                                                                                                                   cAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCgcc                                                                                                                                                                          >  2:12814/1‑61 (MQ=255)                                                                                                                                                                                                                    aGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGTACCCGGTCGa            >  2:527348/1‑220 (MQ=255)                                                                                                                                                                                                                      ggCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGTACCCGGt               >  2:488092/1‑215 (MQ=255)                                                                                                                                                                                                                          |                                                                                                                                                                                                                                CACCTGATCTGCTCCGAGCATCAGCACAATTAACCCAAGATCGATGCGACGAGGTTTATTTCCATGGCACTGACACGCGAACAGCAAATTGCAGCCCTCGAGAAAGACTGGGCCGAAAACCCGCGCTGGAAAGGCGTGACCCGTACCTACACCGCCGCTGATGTCGTTCGCCTGCGTGGCTCCGTGCAACCTGAGCACACCTTTGCGCGTCAGGGCGCAGAAAAACTGTGGAAGCTGGTCACCGAAGGTGCCCACCCGTCCTTCCGCCCCGACAAAGATTTCGTCAACTGCATGGGCGCCCTGACCGGCGGCCAGGCTGTACAACAGGTCAAGGCCGGCATCCAGGCCATCTACCTGTCCGGCTGGCAGGTTGCCGCCGACAACAACTCGGCCGAGTCGATGTACCCTGACCAGTCGCTGTACCCGGTCGACTCGGTACCG  >  AE015451/4653460‑4653900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.