| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4660282 = | 27 (0.680) | 4 (0.110) | 4/316 | NT | 13.0% | coding (640/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F |
| ? | AE015451 | 4660363 = | 28 (0.750) | coding (721/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F | |||||
CGCATGCCACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4660517‑4660282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaacggcAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCCGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGCCAGGCGGCGCCGGTACCGGCTTCCTGCTGCCTGAGCACCTCGAT > AE015451/4660363‑4660590 CGCATGCCACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGG < 1:371061/235‑1CGCATGCCACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGG < 1:598070/235‑1 TGCCACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAA < 2:559682/228‑1 CACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCCCGCACGTCGGCTTGCCCCACACGC > 2:478957/1‑222 CGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCC > 2:309921/1‑145 CTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGGCAACGACTGGTACAAGTCGCTGGCCCGCG < 1:737605/163‑1 GCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGGCAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACG < 2:323141/154‑1 TGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCGCGTCGGCTTGCCCCACACGCCAACGGCAACGACTGGTACAAGTCGCTGGCCCGCGA < 1:655068/123‑1 CGACGTTGTTCACGCACGTCGGCTTGCCCCACACGC > 2:328488/1‑36 CGTCGGCTTGCCCCACACGCCAACGGCAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCAGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGC > 2:261212/1‑211 AACGGCAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCCGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGCCAGGCGGCGCCGGTACCGGCTTCCTGCTGCCTGAGCACCTCGAT < 2:692623/234‑1 ACGGCAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCCGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGCCAGGCGGCGCCGGTACCGGCTTCCTGCTGCCTGAGCACC < 2:582054/228‑1 GCAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCCGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGCCAGGCGGCGCCGGTACCGGCTTCCTGCTGCCTG < 1:323142/219‑1 CGCATGCCACCGGCGTAGTCTTCGAACAATTCGCGGGCGGTAACGCCAAATGGCAGTTCCCACAGGCCTGGGTTCTTCACCTTGCCGGAGAAGCCCATCAGCTTGGTGCCGTGGTCCTCGCTGCCTTCGCGGGCCAGCGACTTGTACCAGTCGTTGCCGTTGGCGACGATGGCCGGGACGTTGCACAGGGTCTCGACGTTGTTCACGCACGTCGGCTTGCCCCACACGCCAACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4660517‑4660282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaacggcAACGACTGGTACAAGTCGCTGGCCCGCGAAGGCAGCGAGGACCACGGCACCAAGCTGATGGGCTTCTCCGGCAAGGTGAAGAACCCAGGCCTGTGGGAACTGCCATTTGGCGTTACCGCCCGCGAATTGTTCGAAGACTACGCCGGTGGCATGCGCGATGGCTTCAAGCTCAAGTGCTGGCAGCCAGGCGGCGCCGGTACCGGCTTCCTGCTGCCTGAGCACCTCGAT > AE015451/4660363‑4660590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |