| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4671163 = | 34 (0.850) | 3 (0.090) | 3/280 | NT | 9.8% | intergenic (+25/+66) | nuoN/PP_4132 | NADH‑quinone oxidoreductase subunit N/conserved protein of unknown function |
| ? | AE015451 | 4671191 = | 27 (0.810) | intergenic (+53/+38) | nuoN/PP_4132 | NADH‑quinone oxidoreductase subunit N/conserved protein of unknown function | |||||
CAGTGCGCGCCGAATTCGAAATGACCCATGAACTCTCCCCCAGCGGCATGCCCAACCCGGAAGTGTACCTGCCTTCGGCCAATGGTGATTTGCGCAAGGCCGCCTTGCCGGGCGCAGGCCAGGGCAGTCCGAGTGAGTGAGGCACCCGTGGGCGCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4671368‑4671163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacaccccgcctaggcggggtgttttTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTCGGACTGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATTGGCCGAAGGCAGGTACACTTCCGGGTTGGGCATGCCGCTGGGGGAGAGTTCATGGGTCATTTCGAATTCGGCGCGCACTGACCAGCCACACGCCTCGGTGGTGCATTGCAAATAAGCGATT > AE015451/4671191‑4671409 CAGTGCGCGCCGAATTCGAAATGACCCATGAACTCTCCCCCAGCGGCATGCCCAACCCGGAAGTGTACCTGCCTTCGGCCAATGGTGATTTGCGCAAGGCCGCCTTGCCGGGCGCAGGCCAGGGCAGTCCGAGTGAGTGAGGCACCCGTGGGCGCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGG > 1:439772/1‑200 GAGTGAGTGAGGCACCCGTGGGCGCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGC < 2:412939/101‑1 CCCGTGGGCGCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTCGGACTGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATg > 2:28039/1‑159 GCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTC < 1:412940/101‑1 AAACACCCCGCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTCGGACTGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATTGGCCGAAGGCAGGTACACTTCCGGGTTGGGCATGCCGCTGGG < 2:607069/167‑1 gtCCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTC < 2:114194/65‑1 CCTAGGCGGGGTGTTTTTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTCGGACTGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATTGGCCGAAGGCAGGTACACTTCCGGGTTGGGCATGCCGCTGGGGGAGAGTTCATGGGTCATTTCGAATTCGGCGCGCACTGACCAGCCACACGCCTCGGTGGTGCATTGCAAATctgtctct > 1:624613/1‑228 CAGTGCGCGCCGAATTCGAAATGACCCATGAACTCTCCCCCAGCGGCATGCCCAACCCGGAAGTGTACCTGCCTTCGGCCAATGGTGATTTGCGCAAGGCCGCCTTGCCGGGCGCAGGCCAGGGCAGTCCGAGTGAGTGAGGCACCCGTGGGCGCAGGTAGCAAAACGTGCAGATAAAAAAACACCCCGCCTAGGCGGGGTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4671368‑4671163‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaacaccccgcctaggcggggtgttttTTTATCTGCACGTTTTGCTACCTGCGCCCACGGGTGCCTCACTCACTCGGACTGCCCTGGCCTGCGCCCGGCAAGGCGGCCTTGCGCAAATCACCATTGGCCGAAGGCAGGTACACTTCCGGGTTGGGCATGCCGCTGGGGGAGAGTTCATGGGTCATTTCGAATTCGGCGCGCACTGACCAGCCACACGCCTCGGTGGTGCATTGCAAATAAGCGATT > AE015451/4671191‑4671409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |