New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5435853	53 (1.330)	6 (0.160)	6/318	NT	11.6%	coding (32/873 nt)	fieF	divalent cation efflux transporter
	?	AE015451	= 5435909	41 (1.080)					coding (88/873 nt)	fieF	divalent cation efflux transporter

GCCCAGGTTGACCCGGCCAAACTGCAGGAAGCCGTCAGCCCCGATGGCAAGGTCGACAACCTGAAGTTGCAGGCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5435614‑5435853 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcctTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAGCGGCAGGCGCTGGCCCAGTTCGCTTTCCAGAATGGC  <  AE015451/5435909‑5435686                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCCAGGTTGACCCGGCCAAACTGCAGGAAGCCGTCAGCCCCGATGGCAAGGTCGACAACCTGAAGTTGCAGGCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGC                                                                                                                                                                                                                                      >  1:90799/1‑236                         gAGGAAGCCGTCAGCCCCGATGGCAAGGTCGACAACCTGAAGTTGCAGGCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCG                                                                                                                                                                                                              <  2:520240/235‑1                                                                         GCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCCGCACACCAGCGCC                                                                                                                                                                                                                                   >  2:167185/1‑167                                                                         GCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGACGATCACTCCCCCGGCCGAACACCAGCCCC                                                                                                                                                                                                                                   >  2:134282/1‑167                                                                                                                                                                                                        TGACCACGGATGATCACTGCCCCGGCTGAACACCAGCGCCTTG                                                                                                                                                                                                                                <  2:234426/43‑1                                                                                                                                                                                                             ACGGATGATCACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCC                                                                                                                                                                                                               <  1:382455/55‑1                                                                                                                                                                                                             ACGGATGATCACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCC                                                                                                                                                                                                               >  2:382454/1‑55                                                                                                                                                                                                                       ACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAGCGGCAGGCGCTGGCCCAGTTCG                >  1:268122/1‑236                                                                                                                                                                                                                              CGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTCGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCCGGCTGCCGGGACCAGGCCCAGGCTGGC                                                                                      >  2:27214/1‑159                                                                                                                                                                                                                                  TGAACACCAGCGCCTTGCTCAGCACTAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGCCCCAGGCTG                                                                                        >  1:535084/1‑153                                                                                                                                                                                                                                               CTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAGCGGCAGGCGCTGGCCCAGTTCGCTTTCCAGAATGGC  >  1:511684/1‑226                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCCAGGTTGACCCGGCCAAACTGCAGGAAGCCGTCAGCCCCGATGGCAAGGTCGACAACCTGAAGTTGCAGGCCATTCTGGAAAGCGAACTGGGCCAGCGCCTGCCGCTGAACGACCCACGGCTGATCCAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5435614‑5435853 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcctTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAGCGGCAGGCGCTGGCCCAGTTCGCTTTCCAGAATGGC  <  AE015451/5435909‑5435686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.