| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 6177506 = | 36 (0.900) | 3 (0.080) | 3/318 | NT | 8.7% | intergenic (‑22/+27) | atpG/atpA | ATP synthase gamma chain/ATP synthase subunit alpha |
| ? | AE015451 | 6177528 = | 29 (0.770) | intergenic (‑44/+5) | atpG/atpA | ATP synthase gamma chain/ATP synthase subunit alpha | |||||
TCACGCTGAACTGATGGCGAAGATCAACGTGAAGGGTGACTTCAACGACGAAATCGACGCAGGCCTGAAAGCCGGTATCGAGAAGTTCAAGGCCACCCAGACCTGGTAAGCCGCAGCGGGGGCTCAGGCCCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6177641‑6177506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATGG > AE015451/6177528‑6177756 TCACGCTGAACTGATGGCGAAGATCAACGTGAAGGGTGACTTCAACGACGAAATCGACGCAGGCCTGAAAGCCGGTATCGAGAAGTTCAAGGCCACCCAGACCTGGTAAGCCGCAGCGGGGGCTCAGGCCCCCG < 2:1629/134‑1 acCGCAGGCCTGAAAGCCGGTATCGAGAAGTTCAAGGCCACCCAGACCTGGTAAGCCGCGGCGGGGGCTAAGGCCCCCGCTGCGGCT < 2:79346/85‑1 AAAGCCGGTATCGAGAAGTTCAAGGCCACCCAGACCTGGTAAGCCGCAGCGGGGGCTCAGGCCCCCGCTGCGTCTTACCAGGTCTGGGTGGCC < 2:226473/93‑1 TCGAGAAGGTCAACGCGACCCAGACCTGGTAAGCCGCAGCGGGGGCTCAGGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCA < 1:580345/162‑1 CCCCCGCTGCGGCGTACCAGCTCTTGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAG < 2:722053/204‑1 CCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATGG < 1:748420/236‑1 CCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATG > 1:548056/1‑235 TGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGACGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAt > 1:57722/1‑214 TCACGCTGAACTGATGGCGAAGATCAACGTGAAGGGTGACTTCAACGACGAAATCGACGCAGGCCTGAAAGCCGGTATCGAGAAGTTCAAGGCCACCCAGACCTGGTAAGCCGCAGCGGGGGCTCAGGCCCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6177641‑6177506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccccgctGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATGG > AE015451/6177528‑6177756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |