New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	6177506 =	36 (0.900)	3 (0.080)	3/318	NT	8.7%	intergenic (‑22/+27)	atpG/atpA	ATP synthase gamma chain/ATP synthase subunit alpha
	?	AE015451	6177528 =	29 (0.770)					intergenic (‑44/+5)	atpG/atpA	ATP synthase gamma chain/ATP synthase subunit alpha

GCGGTATTCCGGGTTGGCGTTGGCCAGATGACCGATCACCTGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATGG  >  AE015451/6177293‑6177756                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     gCGGTATTCCGGGTTGGCGTTGGCCAGATGACCGATCACCTGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTg                                                                                                                                                                                                                                      <  1:634873/236‑1 (MQ=255) gCGGTATTCCGGGTTGGCGTTGGCCAGATGACCGATCACCTGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTg                                                                                                                                                                                                                                      >  1:594177/1‑236 (MQ=255)                      ggcCAGATGACCGATCACCTGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTgg                                                                                                                                                                                                                 <  1:541117/236‑1 (MQ=255)                                         tGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGACCTtct                                                                                                                                                                                                     >  2:523465/1‑229 (MQ=255)                                         tGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATa                                                                                                                                                                                                <  2:384915/234‑1 (MQ=255)                                                    ttCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGc                                                                                                                                                                                   >  1:186388/1‑236 (MQ=255)                                                                                cgcATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCAcc                                                                                                                                                       >  1:738587/1‑236 (MQ=255)                                                                                 gcATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCAccc                                                                                                                                                      >  1:315933/1‑236 (MQ=255)                                                                                             tGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATc                                                                                                                                          >  1:739030/1‑236 (MQ=255)                                                                                              gcgcATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGt                                                                                                                                               <  2:60622/230‑1 (MQ=255)                                                                                                       gCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCa                                                                                                                                >  1:699037/1‑236 (MQ=255)                                                                                                           aCCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTcgtcgt                                                                                                                                                                 <  1:256821/199‑1 (MQ=255)                                                                                                            ccGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTg                                                                                                                                                                                                                                      <  1:191219/129‑1 (MQ=255)                                                                                                             cGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTc                                                                                                                                                   >  2:42898/1‑211 (MQ=255)                                                                                                               tgatggcgaagatcaacgtgaagggtgacttcaacgacgaaatcgacgcaggcctgaaagccggtatcgagaagttcaaggccacccagacctggtaagccgcAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTCGCGTTGACCTTCTCGa                                                                                                                                                                                                  <  1:580345‑M1/59‑1 (MQ=255)                                                                                                               ccACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCCCGTTGATc                                                                                                                                          >  2:146641/1‑218 (MQ=255)                                                                                                                              agcTGGTAATTTTTTGCGGGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCt                                                                                                                                                                                                                       <  1:146197/125‑1 (MQ=255)                                                                                                                                   gTAATTTTTTGCGTGCTTTTGATGCTCTCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGc                                                                                                    <  1:508934/236‑1 (MQ=255)                                                                                                                                               ctGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATc                                                                                                                                          <  1:666037/185‑1 (MQ=255)                                                                                                                                                     ttGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGt                                                                                                              >  2:703985/1‑208 (MQ=255)                                                                                                                                                           accgcaggcctgaaagccggtatcgagaagttcaaggccacccagacctggtaagccgcggcgggggctaaggcccccgctGCGGCt                                                                                                                                                                                                                                 <  2:79346‑M2/6‑1 (MQ=255)                                                                                                                                                                aaTCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCt                                                                       >  1:307800/1‑236 (MQ=255)                                                                                                                                                                     tACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGc                                                                                <  2:594176/222‑1 (MQ=255)                                                                                                                                                                       aaagccggtatcgagaagttcaaggccacccagacctggtaagccgcagcgggggctcaggcccccgctGCGTCTTACCAGGTCTGGGTGGcc                                                                                                                                                                                                               <  2:226473‑M2/24‑1 (MQ=255)                                                                                                                                                                        tGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACt                                                               >  1:601458/1‑236 (MQ=255)                                                                                                                                                                             aTCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCt                                                            <  2:703164/234‑1 (MQ=255)                                                                                                                                                                                 tcgagaaggtcaacgcgacccagacctggtaagccgcagcgggggctcaggcccccgctGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCa                                                                                                                                <  1:580345‑M2/103‑1 (MQ=255)                                                                                                                                                                                    ttGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCGCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGa                                                                                                                                                              <  1:361821/129‑1 (MQ=255)                                                                                                                                                                                    ttGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCtt                                                                      <  1:555876/217‑1 (MQ=255)                                                                                                                                                                                              ggccacccagacctggtaagacgcAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCttt                                                                                                                                                                                        <  2:226473‑M1/69‑1 (MQ=255)                                                                                                                                                                                                             aGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGaa                                              <  1:245452/216‑1 (MQ=255)                                                                                                                                                                                                              ggTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTgaaga                                                                                                        >  2:264274/1‑157 (MQ=255)                                                                                                                                                                                                              ggTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTgaaga                                                                                                        <  1:264275/157‑1 (MQ=255)                                                                                                                                                                                                                agccgcAGCGGGGGCCTTAGCCCCCGCCGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTgcggt                                                                                                                                                                            <  2:79346‑M1/81‑3 (MQ=255)                                                                                                                                                                                                                  aGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGa                      >  1:573141/1‑235 (MQ=255)                                                                                                                                                                                                                     aaGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCg                                                                                                                                      <  1:645920/120‑1 (MQ=255)                                                                                                                                                                                                                     aaGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCg                                                                                                                                      >  2:645919/1‑120 (MQ=255)                                                                                                                                                                                                                     aaGCCGGGGCCTGAGCCCCCGCTGCGGCTTACCCGGGCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGGTGATCTTCGc                                                                                                                                     >  2:90979/1‑121 (MQ=255)                                                                                                                                                                                                                        CGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGa                                                                                                                     <  2:1629‑M1/134‑1 (MQ=255)                                                                                                                                                                                                                                    cccccgctGCGGCGTACCAGCTCTTGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAg                                   <  2:722053‑M2/196‑1 (MQ=255)                                                                                                                                                                                                                                     ccccgctGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATgg  <  1:748420‑M2/229‑1 (MQ=255)                                                                                                                                                                                                                                     ccccgctGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATg   >  1:548056‑M2/8‑235 (MQ=255)                                                                                                                                                                                                                                           tGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGACGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGAcagat                 >  1:57722‑M2/2‑214 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                     GCGGTATTCCGGGTTGGCGTTGGCCAGATGACCGATCACCTGGCGGATACGTTCCGCGTAAGGACGGCTAGCAGCCATGCGCATTTGTGCCTTGCGCATCTTGCTGACCGCCACTTTCTCCATGGCGCTGGTAATTTTTTGCGTGCTTTTGATGCTCGCAATCTTACTGCGAATCTCTTTTGCGCCTGCCATGTATCACCTATCAGGTTAGCAAGCGGGGGCCTGAGCCCCCGCTGCGGCTTACCAGGTCTGGGTGGCCTTGAACTTCTCGATACCGGCTTTCAGGCCTGCGTCGATTTCGTCGTTGAAGTCACCCTTCACGTTGATCTTCGCCATCAGTTCAGCGTGATCACGGTTGAAGAAGGCGATCAGAGCTTGCTCGAAGCTGCCGATCTTGGAGACTTCTACGTCGATCAGGAAGCCACGCTCAGCGGCGTACAGCGACAGAGCCATGTCCGCGATGG  >  AE015451/6177293‑6177756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.