New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1039478	42 (1.050)	3 (0.080)	3/304	NT	7.1%	intergenic (‑84/‑166)	PP_0897/PP_0899	Fumarate hydratase, class I/putative Ferredoxin reductase
	?	AE015451	= 1039462	40 (1.110)					intergenic (‑68/‑182)	PP_0897/PP_0899	Fumarate hydratase, class I/putative Ferredoxin reductase

AATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCGATGCCCT  >  AE015451/1039256‑1039711                                                                                                                                                                                                                               |                                                                                                                                                                                                                                          aaTCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGc                                                                                                                                                                                                                              >  1:529024/1‑236 (MQ=255)              agGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                                  <  2:699610/235‑1 (MQ=255)                  gATTCGTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgc                                                                                                                                                                                                                <  2:703286/233‑1 (MQ=255)                  gATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGcgcg                                                                                                                                                                                                             >  1:693813/1‑236 (MQ=255)                             cAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAgcg                                                                                                                                                                                                  >  1:323378/1‑236 (MQ=255)                                             aTGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCgg                                                                                                                                                                                   >  1:483209/1‑235 (MQ=255)                                                 ccTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaa                                                                                                                                                                                                                      >  2:361934/1‑196 (MQ=255)                                                  cTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCacac                                                                                                                                                                              >  1:728585/1‑235 (MQ=255)                                                     gATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGc                                                                                                                                                                          <  1:311973/236‑1 (MQ=255)                                                      aTGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                           >  2:462098/1‑234 (MQ=255)                                                        gAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGGCGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTc                                                                                                                                                                                                                                  >  1:545395/1‑177 (MQ=255)                                                        gAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAgc                                                                                                                                                                                                   <  2:675996/208‑1 (MQ=255)                                                        gAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAgc                                                                                                                                                                                                   >  1:675997/1‑208 (MQ=255)                                                            tCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGt                                                                                                                                                                   >  1:667527/1‑236 (MQ=255)                                                                 ggggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCt                                                                                                                                                                 <  2:667526/233‑1 (MQ=255)                                                                  gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAgcgcgc                                                                                                                                                                                               >  2:311972/1‑202 (MQ=255)                                                                  gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                           <  1:278517/222‑1 (MQ=255)                                                                  gggTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTg                                                                                                                                                                           >  2:278516/1‑222 (MQ=255)                                                                   ggtggtAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGAcc                                                                                                                                                            >  1:308801/1‑236 (MQ=255)                                                                              gagaTGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCGCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAgc                                                                                                                                                                                                   <  1:173333/186‑1 (MQ=255)                                                                                gaTGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGGCGGCAgcg                                                                                                                                               >  1:206775/1‑236 (MQ=255)                                                                                             gCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTGAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCa                                                                                                                                                                                                          <  2:226719/164‑1 (MQ=255)                                                                                                ccGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCa                                                                                                                                           <  2:248266/223‑1 (MQ=255)                                                                                                       cGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctat                                                                                                                                                                                                                      <  2:123673‑M1/142‑22 (MQ=255)                                                                                                        gCTGTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAg                                                                                                                                                                                                                  <  2:599565/145‑1 (MQ=255)                                                                                                          tctGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTg                                                                                                                              <  2:483208/227‑1 (MQ=255)                                                                                                                       gtcTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGCCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGt                                                                                                                                                                   >  1:241414/1‑177 (MQ=255)                                                                                                                           tgcttgATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                                    >  2:157475/1‑124 (MQ=255)                                                                                                                                  tCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCCGCGCGCAGGCATCTAt                                                                                                                                  >  1:15645/1‑199 (MQ=255)                                                                                                                                               gggcgcTCCTCTTAAAGACGGGAACCTTCAAATAGACGCTAGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGGCAGGCCGACGGAAAACGGCGCGGCAGTATAGCGCGCATCCGCGCCCGGCACACCTGCGGCCGGTCTGGACCTTGGTCGGCAGCGCGCAGGCATCt                                                                                                                                    >  1:399672/3‑184 (MQ=255)                                                                                                                                                   gcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                                    <  2:748394/100‑1 (MQ=255)                                                                                                                                                   gcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGaaaa                                                                                                                                                                                                                    >  1:748395/1‑100 (MQ=255)                                                                                                                                                   gcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCtt                                                                                             >  1:647872/1‑219 (MQ=255)                                                                                                                                                   gcTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGa                                                                                          >  1:509388/1‑222 (MQ=255)                                                                                                                                                    ataagagacaggacgggaacattCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgtcgatttcatccagg                                                                            <  1:720612‑M1/224‑160 (MQ=255)                                                                                                                                                     tcctcTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTAcc                                                                          >  1:650167/1‑236 (MQ=255)                                                                                                                                                                    gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCgg                                                                                                                                                                                                                                        >  2:141635/1‑63 (MQ=255)                                                                                                                                                                    gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCTGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGcc                                                                                                                                                  >  2:246735/1‑148 (MQ=255)                                                                                                                                                                    gAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAAt                                                           >  1:208867/1‑236 (MQ=255)                                                                                                                                                                      aCATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAGAtt                                                          >  2:630178/1‑235 (MQ=255)                                                                                                                                                                       cATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACCCCTGCGGCCGGTCTGGACCATGGt                                                                                                                                                       >  2:704006/1‑141 (MQ=255)                                                                                                                                                                             aaaaGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgcc                                                                                                                       >  2:720611‑M1/1‑51 (MQ=255)                                                                                                                                                                                               ccGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAgcgc                                                                                                                                              <  2:74844/126‑1 (MQ=255)                                                                                                                                                                                                       cACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTg                        >  1:576075/1‑236 (MQ=255)                                                                                                                                                                                                              aaGCGCGTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGgcg                                                                                                                                                                                                               <  2:42163/46‑1 (MQ=255)                                                                                                                                                                                                                        cAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCg         >  1:271457/1‑234 (MQ=255)                                                                                                                                                                                                                              gcttcgacgtgctggtcggctatgtcgagcgtctttttgaatgttcccgtctttaagaggagcgcgctgcatgaccgtgatcaagcaagacgacctgattcagagcgtcgccgacgccctgcaattcatctcgtactaccaccccgtcgatttcatccaggccatgcacgaggcctatctgcgtgaggaatcgcctgctgcacgcgattccatcgcccagatcctgatcaactcg  <  1:622811‑M1/235‑234 (MQ=255)                                                                                                                                                                                                                               |                                                                                                                                                                                                                                          AATCGCGTGCAGCAGGCGATTCCTCACGCAGATAGGCCTCGTGCATGGCCTGGATGAAATCGACGGGGTGGTAGTACGAGATGAATTGCAGGGCGTCGGCGACGCTCTGAATCAGGTCGTCTTGCTTGATCACGGTCATGCAGCGCGCTCCTCTTAAAGACGGGAACATTCAAAAAGACGCTCGACATAGCCGACCAGCACGTCGAAGCGCCTTGCAAGGCGCCGGCAGGTCAGGCCGACGGAAAAAGGCGCGGCAGTATAGCGCGCATCCGTGCCCGGCACACCTGCGGCCGGTCTGGACCATGGTCGGCAGCGCGCAGGCATCTATTTTGCTGGTGTGCTCTGCTTGGCTTACAGTGAGCCTTGGACAGCAGGAGATGTACCGAACATGCCCGAAATTTGCGTGGGCGAGCGCCGCTGGCTGGTGCCCATTGGCAGCAACCTGCTCGATGCCCT  >  AE015451/1039256‑1039711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.