New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1042953 =	44 (1.100)	4 (0.110)	4/316	NT	8.9%	coding (763/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase
	?	AE015451	1043012 =	41 (1.090)					coding (822/1311 nt)	colS	integral membrane sensor signal transduction histidine kinase

GCCCCGCCGCTGGCTCCGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATG  >  AE015451/1042725‑1043183                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                       gCCCCGCCGCTGGCTCCGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGgc                                                                                                                                                                                                                                       <  2:463784/230‑1 (MQ=255)  ctccgccgCTGGCTCCGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGcgcg                                                                                                                                                                                                                                    <  1:296059/230‑1 (MQ=255)  ccccGCCGCTGGCTCCGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGcgcg                                                                                                                                                                                                                                    <  1:549835/232‑1 (MQ=255)                 cGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATgcgc                                                                                                                                                                                                                 <  1:466323/236‑1 (MQ=255)                      tATGCGGCAGACGAAGGCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATgcgc                                                                                                                                                                                                                 <  2:517323/231‑1 (MQ=255)                                 cgccgcattgcgcagcaggttgcccatcaccgactgcaggaaggtggcgttgtacagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCt                                                                                                                                                                                                 <  1:612248‑M1/40‑1 (MQ=255)                                   ccgcattgcgcagcaggttgcccatcaccgactgcaggaaggtggcgttgtacagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcgcgcg                                                                                                                                                                                                                                    <  1:262795‑M1/5‑1 (MQ=255)                                           cAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCAt                                                                                                                                                                                          <  2:647907/233‑1 (MQ=255)                                                     tGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCAt                                                                                                                                                                                          <  2:339378/223‑1 (MQ=255)                                                        ccatcaccgactgcaggaaggtggcgttgtacagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcg                                                                                                                                                                                                                                        <  1:294683‑M1/1‑1 (MQ=255)                                                        ccatcaccgactgcaggaaggtggcgttgtacagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGcccgcgcca                                                                                                                                                                            <  2:628453‑M1/61‑3 (MQ=255)                                                            cgacgaTACCCTGGGTCGCCGGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAACCCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCcg                                                                                                                                                                                 <  1:434448/225‑1 (MQ=255)                                                             accgactgcaggaaggtggcgttgtacagcgcagggctagcgctcccgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcgcgc                                                                                                                                                                                                                                     >  1:159386‑M1/169‑172 (MQ=255)                                                                   tgcaggaaggtggcgttgtacagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTg                                                                                                                                                                                      >  2:612247‑M1/163‑213 (MQ=255)                                                                     ccTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAggg                                                                                                                                                               >  2:433102/1‑234 (MQ=255)                                                                            cGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCggg                                                                                                                                                                                                                                  <  2:557705/160‑1 (MQ=255)                                                                            cGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCggg                                                                                                                                                                                                                                  >  1:557706/1‑160 (MQ=255)                                                                                 gCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGaa                                                                                                                                                                                                                          >  2:604619/1‑163 (MQ=255)                                                                                 gCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTc                                                                                                                                                   >  1:245731/1‑234 (MQ=255)                                                                                 gCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCAc                                                                                                                                                 >  1:418721/1‑236 (MQ=255)                                                                                 gCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCAc                                                                                                                                                 >  1:58400/1‑236 (MQ=255)                                                                                       tGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCAt                                                                                                                                                                                          <  2:272466/189‑1 (MQ=255)                                                                                       cagcacagggctagcgctcacgcggccatcgaaatacagggtgaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcGCGCggg                                                                                                                                                                                                                                  >  2:701112‑M1/143‑149 (MQ=255)                                                                                            tcaCCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGc                                                                                                                                             <  1:465676/227‑1 (MQ=255)                                                                                                 cgcgAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGGGATGAGGGGGCGGTGGCg                                                                                                                                                     >  1:119220/1‑216 (MQ=255)                                                                                                       cGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTgg                                                                                                                                                                                                                                        <  1:70837/127‑1 (MQ=255)                                                                                                           tGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGcc                                                                                                                          <  2:383570/233‑1 (MQ=255)                                                                                                                 ccAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCcg                                                                                                                                                                                 <  2:678085/172‑1 (MQ=255)                                                                                                                               cACGAGCTGTGTGTGCCGTTGATCGTGTTGGCTACCTCGTGTGAGCTTCTGATGGTTAGCCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGGGCTGGt                                                                                                                                                                                                         <  2:293251/134‑1 (MQ=255)                                                                                                                                 gaggcctttctgttcgatggtgtcacgccacaccccgatgagctcgtcggccacttcgcgcagggtcgcccgtgacgccactgccccctcatcacgctgcgcgcg                                                                                                                                                                                                                                    >  2:63673‑M1/101‑105 (MQ=255)                                                                                                                                  gcgCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCaa                                                                                                                                                                                                      <  2:240906/132‑1 (MQ=255)                                                                                                                                   ggCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAg                                                                                                                                                                          <  1:110065/160‑1 (MQ=255)                                                                                                                                                        tgtTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGACAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCggg                                                                                                           <  1:168965/203‑1 (MQ=255)                                                                                                                                                        tgtTGGCGACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCGCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCa                                                                                           <  1:10573/219‑1 (MQ=255)                                                                                                                                                          ttGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCAc                                                                        >  1:587815/1‑236 (MQ=255)                                                                                                                                                            ggCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGt                                                                                                                                                                       >  2:471056/1‑139 (MQ=255)                                                                                                                                                               tACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCAccc                                                                      <  2:587814/233‑1 (MQ=255)                                                                                                                                                                     gtgtGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGGGGCGTCCCGGGCGACCCTgcgc                                                                                                                                   >  2:168965/1‑166 (MQ=255)                                                                                                                                                                       gtgAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATgcgc                                                                                                                                                                                                                 >  1:496838/1‑86 (MQ=255)                                                                                                                                                                       gtgAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATgcgc                                                                                                                                                                                                                 <  2:496837/86‑1 (MQ=255)                                                                                                                                                                         gAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGtgat                                                                                                                                                                    >  2:327555/1‑129 (MQ=255)                                                                                                                                                                         gAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGtgat                                                                                                                                                                    <  1:327556/129‑1 (MQ=255)                                                                                                                                                                          aGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGc                                                        >  1:472391/1‑236 (MQ=255)                                                                                                                                                                                   tGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAg                                                <  1:433103/235‑1 (MQ=255)                                                                                                                                                                                      aaaaCCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTc                                                                          <  1:620414/206‑1 (MQ=255)                                                                                                                                                                                       atgcccTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTa                                           <  1:303003/233‑1 (MQ=255)                                                                                                                                                                                        aaCCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTa                                           <  1:604620/235‑1 (MQ=255)                                                                                                                                                                                          cccTGGCCTCGGTGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAgcg                                              <  2:528252/230‑1 (MQ=255)                                                                                                                                                                                          cccTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                    >  2:593293/1‑192 (MQ=255)                                                                                                                                                                                          cccTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                    <  1:593294/192‑1 (MQ=255)                                                                                                                                                                                           gcTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTGCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGAt                                                           <  1:187266/215‑1 (MQ=255)                                                                                                                                                                                                ggtcgcccgtgacgccactgccccctcatcacgctgcGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCg                                                                                                   <  1:447507‑M1/134‑1 (MQ=255)                                                                                                                                                                                                     aTGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACa                                                                                    <  1:140310/181‑1 (MQ=255)                                                                                                                                                                                                                    gCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTg              <  1:411039/236‑1 (MQ=255)                                                                                                                                                                                                                     ccAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGAt                                                           <  1:471057/190‑1 (MQ=255)                                                                                                                                                                                                                       aGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGc             <  2:472390/234‑1 (MQ=255)                                                                                                                                                                                                                            gAGCGCGCGGCGCGAGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGGCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTAACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAg                                                                               <  1:708333/163‑1 (MQ=255)                                                                                                                                                                                                                                gcgTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATg  >  1:644704/1‑236 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                       GCCCCGCCGCTGGCTCCGGATTATGCGGCAGACGAAGTCGGCCAGCTTGCAGTGGCTTTCGACGATACCCTGGGTCGCCTGCGTGATGCGCTGACCCGCGAGCGGCTGTTCACCAGCGACGTCAGCCACGAGCTGCGCACGCCGTTGATGGTGTTGGCTACCTCGTGTGAGCTTCTGATGGAAAACCCTGGCCTCGATGCCCGCGCGCGTAGCCAGGTGGAGCGCGTGGCGCGGGCCACCGAAGAGATGCGCGAGCTGGTCAAGACCTTCCTCATGTTGGCCCGCGCGCAGCGTGATGAGGGGGCAGTGGCGTCACGGGCGACCCTGCGCGAAGTGGCCGACGAGCTCATCGGGGTGTGGCGTGACACCATCGAACAGAAAGGCCTCACCCTGTATTTCGATGGCCGCGTGAGCGCTAGCCCTGTGCTGTACAACGCCACCTTCCTGCAGTCGGTGATG  >  AE015451/1042725‑1043183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.