New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1074831 =	50 (1.250)	3 (0.080)	3/320	NT	7.4%	coding (25/1452 nt)	gatA	Glutamyl‑tRNA(Gln) amidotransferase subunit A
	?	AE015451	1075058 =	28 (0.740)					coding (122/309 nt)	gatC	Aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit C

GCCGTTGGTGCAGAACAGGTCTTTGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCAGTGGTATCGACCGCTTGCATCTGGTCGACCAGGCCGA  >  AE015451/1074607‑1075055                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                 gCCGTTGGTGCAGATCAGGTCTTTGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCg                                                                                                                                                                                                                              <  1:4910/229‑1 (MQ=255)               gtttttccgagcacgccagcagaatttcgcggccgttagaccgccagaaagctgacatgttcctcaccgcggacccaaattccgttctttgtttcccttggagatcctcatggcgcttgaacgctgcgacgtggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcattct                                                                                                                                                                                                                                <  2:122943‑M1/3‑1 (MQ=255)                   gTCTTTGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATgg                                                                                                                                                                                                        >  2:708432/1‑233 (MQ=255)                      tttGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAggg                                                                                                                                                                                                                       >  1:724647/1‑215 (MQ=255)                      tttGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCa                                                                                                                                                                                                                    >  2:308315/1‑218 (MQ=255)                      tttGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAg                                                                                                                                                                                                     >  2:671402/1‑233 (MQ=255)                      tttGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGct                                                                                                                                                                                                  >  1:599522/1‑236 (MQ=255)                          cacgccagcagaatttcgcggccgttagaccgccagaaagctgacatgttcctcaccgcggacccaaattccgttctttgtttcccttggagatcctcatggcgcttgaacgctgcgacgtggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcatTCTCGGCCAGGGTCAATTGATGCATGGCAGGc                                                                                                                                                                                                   >  1:249085‑M1/200‑231 (MQ=255)                           gggCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTa                                                                                                                                                                                               >  1:112695/1‑234 (MQ=255)                           gggCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATc                                                                                                                                                                                             >  1:15177/1‑236 (MQ=255)                                agcagaatttcgcggccgttagaccgccagaaagctgacatgttcctcaccgcggacccaaattccgttctttgtttcccttggagatcctcatggcgcttgaacgctgcgacgtggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcatTCTCGGcc                                                                                                                                                                                                                           >  1:379111‑M1/194‑201 (MQ=255)                                       cACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATg                                                                                                                                                                                 >  1:538719/1‑236 (MQ=255)                                          ccAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGAc                                                                                                                                                                               <  1:671403/235‑1 (MQ=255)                                           cagcagCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACtt                                                                                                                                                                             <  1:706121/236‑1 (MQ=255)                                                     cTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCgg                                                                                                                                                                                                                             <  1:67269/178‑1 (MQ=255)                                                      tGGTTTCGCCCGCGGCGCGACGTGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGACCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAg                                                                                                                                                                                                     <  1:29866/201‑1 (MQ=255)                                                        gTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTc                                                                                                                                                                                     <  1:71666/215‑1 (MQ=255)                                                         tttCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGAt                                                                                                                                                                                  >  1:68329/1‑217 (MQ=255)                                                                     cgcgACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCCGCTCTTCGGAAGAAAACGATTTGTCGGCGAGGCCGCGGGCGGTCTCGGCCAggggc                                                                                                                                                                                                                     >  2:71666/1‑168 (MQ=255)                                                                              cATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGgc                                                                                                                                          <  1:308316/236‑1 (MQ=255)                                                                                   gcggacccaaattccgttctttgtttcccttggagatcctcatggcgcttgaacgctgcgacgtggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcatTCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACa                                                                                                                                                              >  1:686823‑M1/143‑211 (MQ=255)                                                                                             ccTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATg                                                                                                                                                                                                         <  2:112695/158‑1 (MQ=255)                                                                                                 gCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACtt                                                                                                                                                                             <  1:334987/182‑1 (MQ=255)                                                                                                      gttgtttcccttggagatcctcagggcgcttgaacgctgcgacggggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcatTCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTggg                                                                                                                                                                         >  2:142015‑M1/124‑181 (MQ=255)                                                                                                         ccAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTc                                                                                                                                                                                     <  2:372670/166‑1 (MQ=255)                                                                                                          cAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAgg                                                                                                                          <  2:153364/224‑1 (MQ=255)                                                                                                          cAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAgg                                                                                                                          >  1:153364/1‑224 (MQ=255)                                                                                                          cAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCgcgc                                                                                                                  >  2:731681/1‑232 (MQ=255)                                                                                                          cAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCgcgc                                                                                                                  <  1:731682/232‑1 (MQ=255)                                                                                                              tCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCt                                                                                                          >  1:371066/1‑236 (MQ=255)                                                                                                                    gTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTg                                                                                                                                                                           >  2:282729/1‑165 (MQ=255)                                                                                                                          cTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTg                                                                                                                                                                                                                >  2:158158/1‑122 (MQ=255)                                                                                                                           tgatgaAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAggg                                                                                                                                                                 >  2:79241/1‑167 (MQ=255)                                                                                                                           tgatgaAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTg                                                                                              >  1:379080/1‑235 (MQ=255)                                                                                                                                  gCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGGCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCAt                                                                                                                                                                                                          <  2:79809/120‑1 (MQ=255)                                                                                                                                  gCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCGTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACt                                                                                                                                                                                      <  2:216312/140‑1 (MQ=255)                                                                                                                                     gaacgctgcgacgtggaaaagatcgcccatctggcccgcctgggcctgaatgatggcgaactgccacgcattaccgacgccctgaacagcatTCTCGGCCa                                                                                                                                                                                                                          <  2:494758‑M1/9‑1 (MQ=255)                                                                                                                                          tCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGc                                                                                                                                                                                                       >  2:566192/1‑115 (MQ=255)                                                                                                                                          tCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGc                                                                                                                                                                                                       <  1:566193/115‑1 (MQ=255)                                                                                                                                          tCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGgcg                                                                                                                                         >  1:233610/1‑177 (MQ=255)                                                                                                                                            tgtgGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGAc                                                                                                                                                                               <  1:3701/137‑1 (MQ=255)                                                                                                                                               ggatCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTACGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACtt                                                                                                                                                                             <  1:158158/133‑1 (MQ=255)                                                                                                                                                             gATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGt                                                                                                    <  1:733420/195‑1 (MQ=255)                                                                                                                                                                    gcCGGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCgct                                                                             <  2:412246/211‑1 (MQ=255)                                                                                                                                                                      gagcagGGCGCCGGTCGGCTCTTCGGAAGAAAACGATTTGTCGGCGGGTCCGCGGGCGATCTCGGCCAGGGTCAATTGAGGCATGGCAGGc                                                                                                                                                                                                   <  2:183239/90‑1 (MQ=255)                                                                                                                                                                              cgcCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATg                                          <  1:708433/236‑1 (MQ=255)                                                                                                                                                                                 cGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCa                                       >  1:550962/1‑236 (MQ=255)                                                                                                                                                                                   gtaaGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGcc                                                      <  2:379079/216‑1 (MQ=255)                                                                                                                                                                                         tctTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAg                                                                                         <  1:200948/178‑1 (MQ=255)                                                                                                                                                                                                aagaaAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCAGTGGTATCGACCGCt                        >  1:344264/1‑236 (MQ=255)                                                                                                                                                                                                 agaaAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAgg                                                                                                                                                                                                    >  1:689319/1‑63 (MQ=255)                                                                                                                                                                                                 agaaAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAgg                                                                                                                                                                                                    <  2:689318/63‑1 (MQ=255)                                                                                                                                                                                                              tCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACtt                                                                                               <  2:15177/151‑1 (MQ=255)                                                                                                                                                                                                              tCGGCGAGTCCGCGGGCGATCCCGGCCAGGGTCAATCGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGgcg                                                                                                                                         <  2:545601/109‑1 (MQ=255)                                                                                                                                                                                                                  cGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCg                                                              <  1:409764/180‑1 (MQ=255)                                                                                                                                                                                                                      tCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCAGTGGTATCGACCGCTTGCATCTGGTCGACCAGGCCg   <  1:673369/235‑1 (MQ=255)                                                                                                                                                                                                                         gcgGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCAGTGGTATCGACCGCTTGCATCTGGTCGACCAGGCCga  >  2:654189/1‑233 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                 GCCGTTGGTGCAGAACAGGTCTTTGTGGGCGATCGGTGCACCCAGCAGCGCGCTGGTTTCGCCCGCGGCGCGACGGGCATCGGCGGCACGCGCCTGGCCCAGGGCCAGGTCTTCGGTGACGCTGATGAAGCTGTTGATCTGTGGGTCGAGCTGCTTGATGCGCGCCAGCAGGGCGCCGGTCAGCTCTTCGGAAGAAAACGATTTGTCGGCGAGTCCGCGGGCGATCTCGGCCAGGGTCAATTGATGCATGGCAGGCTCTATCCCTTACTCGATGACTTTGGGAACCAGGTACAGACCGCTTTCGGTCGACGGCGCGATGGCCTGGTAGGCATCGCGCTGGTTGCTTTCGGTGACTTGGTCAGGACGCAGGCGCTGGCTGGCCTCCAGCGGGTGGGCCAGGGGCTCGATGCCAGTGGTATCGACCGCTTGCATCTGGTCGACCAGGCCGA  >  AE015451/1074607‑1075055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.