New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1899908	31 (0.780)	4 (0.110)	4/314	NT	14.3%	coding (459/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase
	?	AE015451	= 1899959	19 (0.510)					coding (510/4026 nt)	PP_1703	assimilatory nitrate reductase/sulfite reductase

CACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGTTTCTGCAGGTGCGCCCCGGCAGTGACATGGCCTTGCTCAACGGCCTTTTGCAC  >  AE015451/1899677‑1900139                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                        cACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATcac                                                                                                                                                                                                                                      >  1:534010‑M1/1‑232 (MQ=255)                   cATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACCTCGAGTCCAACTCGCGCCTGTGCATGGCCCGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGCTGGCCCAcccg                                                                                                                                                                                                                               >  2:217648/1‑222 (MQ=255)                    aTCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCCGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAg                                                                                                                                                                                                                    >  1:534527/1‑234 (MQ=255)                    aTCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGa                                                                                                                                                                                                                  >  1:440652/1‑236 (MQ=255)                         tGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAg                                                                                                                                                                                                                    >  1:559237/1‑229 (MQ=255)                            cACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAg                                                                                                                                                                                                           <  1:692951/235‑1 (MQ=255)                            cACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGc                                                                                                                                                                                                          <  1:715827/236‑1 (MQ=255)                             aCCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCa                                                                                                                                                                                                         <  1:19205/236‑1 (MQ=255)                             aCCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCa                                                                                                                                                                                                         <  1:446553/236‑1 (MQ=255)                                 ccgAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGc                                                                                                                                                                                                      <  1:636440/235‑1 (MQ=255)                                              cgGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGc                                                                                                                                                                                                                             <  2:534526/199‑1 (MQ=255)                                                gCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCATCAGTGGCTACAAGCTGTCGCTTGGCGCCGATcaccagaaatacgtcggcgtgctcgaagtcctggtaactgccaggtgggc                                                                                                                                                                                       <  1:602125‑M1/235‑51 (MQ=255)                                                     atcGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATcaccagaaatacgtcggcgtgctcgaagtcctggtaactgccaggtgggccatc                                                                                                                                                                                   <  2:534009‑M1/234‑55 (MQ=255)                                                               aCGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACAt                                                                                                                                                                        <  1:730570/235‑1 (MQ=255)                                                                 ggCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACg                                                                                                                                                                                                 <  1:200287/208‑1 (MQ=255)                                                                    ccGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGa                                                                                                                                                                  <  1:649802/236‑1 (MQ=255)                                                                           ccGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATg                                                                                                                                                                                                                                        <  2:410917/159‑1 (MQ=255)                                                                           ccGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATg                                                                                                                                                                                                                                        >  1:410918/1‑159 (MQ=255)                                                                               ggCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGt                                                                                                                                                                                       <  1:271274/204‑1 (MQ=255)                                                                               ggCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGt                                                                                                                                                                                       >  2:271273/1‑204 (MQ=255)                                                                                gcgcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGatcggcgccaagcgacagcttgtagcca                                                                                                                                                          >  1:279100‑M2/1‑204 (MQ=255)                                                                                gcgcTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGa                                                                                                                                                       >  1:452717/1‑235 (MQ=255)                                                                                     gTACGTGGCCGGGCAAAGGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGatcggcgccaagc                                                                                                                                                                         >  2:732436‑M2/1‑199 (MQ=255)                                                                                              cGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTgg                                                                                                                                                                                        <  1:566080/188‑1 (MQ=255)                                                                                              cGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTgg                                                                                                                                                                                        >  2:566079/1‑188 (MQ=255)                                                                                                   aaaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGcc                                                                                                                                        >  1:729595/1‑231 (MQ=255)                                                                                                   aaaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTg                                                                                                                                      >  2:661347/1‑233 (MQ=255)                                                                                                    aaTGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCtt                                                                                                                                   <  1:694234/235‑1 (MQ=255)                                                                                                      tGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATcaccagaaatacgtc                                                                                                                                                                                                                          <  2:92654‑M1/146‑16 (MQ=255)                                                                                                                              ccAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGAT                                                                                                                                                                                                                                         <  1:409717‑M1/107‑1 (MQ=255)                                                                                                                              ccAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGAT                                                                                                                                                                                                                                         >  2:409716‑M1/1‑107 (MQ=255)                                                                                                                                    aGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGCGCACGCCGCCGTATTTCTGGTGAGCGGCGCCAACATGGCCGACTGCCACCCGCTc                                                                                                                                                     >  2:105575/1‑185 (MQ=255)                                                                                                                                          ccAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGAc                                                                                            <  1:690641/236‑1 (MQ=255)                                                                                                                                           cAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCgg                                                                                                                  <  1:539119/213‑1 (MQ=255)                                                                                                                                                                                            aTGGCCAGCGCCAGCAGTGGCTACACGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGt                                                                                                                                                                                       <  2:586560/95‑1 (MQ=255)                                                                                                                                                                                            aTGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGCTCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCcg                                                                                         >  2:165762/1‑189 (MQ=255)                                                                                                                                                                                            aTGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGTTTCTGCAGGTgcg                                          >  1:605793/1‑236 (MQ=255)                                                                                                                                                                                                 cagcgccagcAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGTTTCTGCAGGTGCGCCCCg                                     <  1:661348/236‑1 (MQ=255)                                                                                                                                                                                                             tGGCTACAAGCTGTCGCTTGGCGCCGATcaccagaaatacgtcggcgtgctcgaagtcctggtaactgccaggtgggccatcggcgccaagcgacagcttgtagccactgctggcgctggccatgcacaggcgcgagttggactcgatgtggcgcgtacggataaagcccttggccaacttgttggccaggtactgggcctccagcgacatttgcccggacacgtacagcgc                             >  1:279100‑M1/1‑28 (MQ=255)                                                                                                                                                                                                                       cTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGTTTCTGCAGGTGCGCCCCGGCAGTGACATGGCCTTGCTCa                <  1:265761/235‑1 (MQ=255)                                                                                                                                                                                                                            gCTTGGCGCCGATcaccagaaatacgtcggcgtgctcgaagtcctggtaactgccaggtgggccatcggcgccaagcgacagcttgtagccactgctggcgctggccatgcacaggcgcgagttggactcgatgtggcgcgtacggataaagcccttggccaacttgttggccaggtactgggcctccagcgacctttgcccggccacgtac                                  >  2:732436‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                            gCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCCAGGCCGGTGCGAAGCTgct                                                                                                      >  2:92332/1‑142 (MQ=255)                                                                                                                                                                                                                                 gcgcCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGttt                                                     >  2:661827/1‑188 (MQ=255)                                                                                                                                                                                                                                      gATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGatcggcgccaagcgacagcttgtagccactgctggcgctggccatgcacaggcgcgagttggactcgatgtggcgcgtacggataaagcccttggccaacttgttggccaggtactgggcctccagcgacatttgcccggacacgtacagcgccacggcatccgggccgtgctggtcgat  <  2:534009‑M2/234‑181 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                        CACCAGCATGGACCAGGCCATCGCTGCCACCGCCGAGCGTCTGCGCGGCATCATCGACCAGCACGGCCCGGATGCCGTGGCGCTGTACGTGTCCGGGCAAATGTCGCTGGAGGCCCAGTACCTGGCCAACAAGTTGGCCAAGGGCTTTATCCGTACGCGCCACATCGAGTCCAACTCGCGCCTGTGCATGGCCAGCGCCAGCAGTGGCTACAAGCTGTCGCTTGGCGCCGATGGCCCACCTGGCAGTTACCAGGACTTCGAGCACGCCGACGTATTTCTGGTGATCGGCGCCAACATGGCCGACTGCCACCCGATCCTGTTCCTGCGCCTGCTTGATCGGGTCAAGGCCGGTGCGAAGCTGATCGTCGTCGACCCGCGGCGCAGCGCAACCGCCGACAAGGCCGACCTGTTTCTGCAGGTGCGCCCCGGCAGTGACATGGCCTTGCTCAACGGCCTTTTGCAC  >  AE015451/1899677‑1900139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.