New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2749686 =	38 (0.950)	4 (0.100)	4/322	NT	10.9%	coding (804/849 nt)	PP_2406	putative quinate/shikimate dehydrogenase
	?	AE015451	2749762 =	29 (0.760)					coding (728/849 nt)	PP_2406	putative quinate/shikimate dehydrogenase

GGGATTATGGTGGGCAGGAACAGGTGATACAGGCTTTGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCACCGGCAGTGGCGTGCCCGGTAGCTTGGCCATGCCCACCGGCGTGGTGTTGACCAGCCCGTCC  >  AE015451/2749472‑2749911                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  gggATTATGGTGGGCAGGAACAGGTGATACAGGCTTTGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCACTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCCTGCCCGCGAAGAAGCCAACACTCTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGc                                                                                                                                                                                                                 <  2:709462/233‑1 (MQ=255)         ggtggGCAGGAACAGGTGATACAGGCTTTGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCt                                                                                                                                                                                                       <  1:396880/235‑1 (MQ=255)                aGGAACAGGTGATACAGGCTTTGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCAGCGCCGCATGCGCCTGCCGCCCGCTGAACAg                                                                                                                                                                                                                  >  1:30348/1‑217 (MQ=255)                                tggcaccgacctggccacagccttggccgaagcggacgggctggtcaacaccacgccggtgggcatggccaagctaccgggcacgccactgccggtggagttgttgcatccccgcctgtgggtggcagagatcatctacttcccgctggagaccgaactgctgcgcgcggcccgggcactggcCTGCCGCCCGCTGAACAGCTCGAATGc                                                                                                                                                                                                         <  1:459311‑M1/27‑1 (MQ=255)                                tggcaccgacctggccacagccttggccgaagcggacgggctggtcaacaccacgccggtgggcatggccaagctaccgggcacgccactgccggtggagttgttgcatccccgcctgtgggtggcagagatcatctacttcccgctggagaccgaactgctgcgcgcggcccgggcactggcCTGCCGCCCGCTGAACAGCTCGAATGc                                                                                                                                                                                                         >  2:459310‑M1/184‑210 (MQ=255)                                   tttGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGcc                                                                                                                                                                                                                                   >  2:488942/1‑181 (MQ=255)                                     tGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGcc                                                                                                                                                                                   >  1:77412/1‑227 (MQ=255)                                        tGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTtgctgc                                                                                                                                                                         >  1:53373/1‑234 (MQ=255)                                              aaaaaGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTtgctgc                                                                                                                                                                         >  1:78227/1‑228 (MQ=255)                                                  aGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGCATGCCTTCCCCGcc                                                                                                                                                                                               >  2:185613/1‑202 (MQ=255)                                                                     ggCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGc                                                                                                                                                       <  2:729375/223‑1 (MQ=255)                                                                         tctTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGccct                                                                                                                                                                                 >  1:88991/1‑191 (MQ=255)                                                                          ctTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCTAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCGTCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTc                                                                                                                                                                                                               <  2:521522/162‑1 (MQ=255)                                                                              gcgGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTGTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGa                                                                                                                                                                                           <  1:623610/178‑1 (MQ=255)                                                                                        cccACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCt                                                                                                                                                                                                                                  >  2:624836/1‑129 (MQ=255)                                                                                        cccACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCt                                                                                                                                                                                                                                  <  1:624837/129‑1 (MQ=255)                                                                                              gggACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTcc                                                                                                                    <  2:410871/233‑1 (MQ=255)                                                                                                     tGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAgcgcgc                                                                                                                                                             >  1:83788/1‑185 (MQ=255)                                                                                                     tGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGcc                                                                                                                                                      >  2:174937/1‑192 (MQ=255)                                                                                                     tGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGcagcag                                                                                                                              >  2:174941/1‑216 (MQ=255)                                                                                                       cAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGc                                                                                                                                                                                                                 <  1:501317/131‑1 (MQ=255)                                                                                                       cAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGc                                                                                                                                                                                                                 >  2:501316/1‑131 (MQ=255)                                                                                                       cAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCg                                                                                                                >  2:192163/1‑228 (MQ=255)                                                                                                        aaTCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTg                                                                                                                                                                                             >  1:328389/1‑150 (MQ=255)                                                                                                            aGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCGGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGtt                                                                                                                            >  2:18291/1‑211 (MQ=255)                                                                                                             gTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAgga                                                                                                         >  1:101961/1‑227 (MQ=255)                                                                                                                  gTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGc                                                                                             >  1:328899/1‑236 (MQ=255)                                                                                                                  gTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGc                                                                                             >  1:526574/1‑236 (MQ=255)                                                                                                                       cgcAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGccacc                                                                                         >  1:668619/1‑235 (MQ=255)                                                                                                                            tcccTGGGGGGGCGGGCGTGCCCGCGAAGAAGCCAACCCTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCt                                                                                                                                                                                                       <  2:256397/118‑1 (MQ=255)                                                                                                                               cTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGAtct                                                                                                 >  1:537069/1‑219 (MQ=255)                                                                                                                                           gCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCgg                                                                                                               >  2:315423/1‑193 (MQ=255)                                                                                                                                             gTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTc                                                                  >  1:707422/1‑236 (MQ=255)                                                                                                                                             gTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCCCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACACCt                                                                   >  2:518733/1‑235 (MQ=255)                                                                                                                                               gCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGACCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGc                                                                                                                 >  1:589641/1‑187 (MQ=255)                                                                                                                                                   gcgAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATg                                                                                                                                                                                >  1:284304/1‑120 (MQ=255)                                                                                                                                                   gcgAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATg                                                                                                                                                                                <  2:284303/120‑1 (MQ=255)                                                                                                                                                   gcgAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCg                                                                                                                                                            <  2:496843/140‑1 (MQ=255)                                                                                                                                                                      tCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACCGGCGGGGATGCAACAACTc                                                                  >  2:512243/1‑211 (MQ=255)                                                                                                                                                                       cTATCAGGTGAAACTGGCAAAGTGCGCCCGCATCCGGGCCGCATCCGCCTGCCGCCCGCTGACCAGCTCGAATGCCTTCACCGCTTGGAACCCCGCCATGTTGCTGCCACCCAGCGTGCGGCAg                                                                                                                                                        <  2:279294/124‑1 (MQ=255)                                                                                                                                                                                gAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCACCGGCAGTGGCGTGCCCGGTAGCTTGGCCATGc                               >  1:631547/1‑236 (MQ=255)                                                                                                                                                                                    gagaccgaactgctgcgcgcggcccgggcactgggCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGGACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGCGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAgatgat                                                                                                   <  1:557040‑M1/129‑1 (MQ=255)                                                                                                                                                                                       accgaactgctgcgcgcggcccgggcactgggCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCgcag                                                                                                                                 <  2:351143‑M1/99‑1 (MQ=255)                                                                                                                                                                                                 ccTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCACCGGCAGTGGCGTGCCCGGTAGCTTGGCCATGCCCACCg                         <  1:586325/225‑1 (MQ=255)                                                                                                                                                                                                              cgcATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCGGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCACCGGCAGTGGCGTGCCCGGTAGCTTGGCCATGCCCACCGGCGTGGTGTTGACCAGCCCGTcc  <  1:18291/235‑1 (MQ=255)                                                                                                                                                                                                                    cGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCAc                                                               <  1:174941/168‑1 (MQ=255)                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  GGGATTATGGTGGGCAGGAACAGGTGATACAGGCTTTGCTGGATGAAAAAGGGTGATTCTCCTGTACCGGCCTCTTCGCGGGCATGCCCCACAGGGACAGTGCAATCAGTAACGTTTGCGCAGTACCTGTGGGAGCGGGCGTGCCCGCGAAGAAGCCAACACTTTTCTATCAGGTGAAACTGGCAAAGTGCGCCTGCATCCGCGCCGCATCCGCCTGCCGCCCGCTGAACAGCTCGAATGCCTTCACCGCCTGGAACACCGCCATGTTGCTGCCATCCAGCGTGCGGCAGCCCAGTGCCCGGGCCGCGCGCAGCAGTTCGGTCTCCAGCGGGAAGTAGATGATCTCTGCCACCCACAGGCGGGGATGCAACAACTCCACCGGCAGTGGCGTGCCCGGTAGCTTGGCCATGCCCACCGGCGTGGTGTTGACCAGCCCGTCC  >  AE015451/2749472‑2749911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.