New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 2909022 =34 (0.850)4 (0.110) 4/318 NT 12.9% coding (1416/1737 nt) aprDA alkaline protease secretion transporter ATP‑binding protein
?AE015451 2909058 = 22 (0.580)coding (1380/1737 nt) aprDA alkaline protease secretion transporter ATP‑binding protein

CCAAGCATGTGCACACCCCCGTCGCGCAGCATCAGTATCTGATCGACCGCGCACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGT  >  AE015451/2908795‑2909246
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 
aggccggcaaggtgcgcctggacggcgccgatatcttcacctggaacaaggccgaactgggcccgtggctgggctacctgccgcaggacgtggagctgttcgaaggcaccatcgccgaaaacatcgcccgctttgccgaggtggacagcgacgcggtgatccgtgccgcccgcagcagcggtgtacacgacatgatcctgcgcttcccgcagggttacgacacccgcCTGgccgc                                                                                                                                                                                                                            <  1:678101‑M1/8‑1 (MQ=255)
                 cccGTCGCGCAGCATCAGTATCTGATCGACCGCGCACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCa                                                                                                                                                                                                           >  1:206805/1‑235 (MQ=255)
                                     tCTGATCGACCGCGCACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAgaa                                                                                                                                                                                             <  1:55234/228‑3 (MQ=255)
                                       acctggaacaaggccgaactgggcccgtggctgggctacctgccgcaggacgtggagctgttcgaaggcaccatcgccgaaaacatcgcccgctttgccgaggtggacagcgacgcggtgatccgtgccgccgcagcagcggtgtacacgacatgatcctgcgcttcccgccgggttacgacacccgcCTGgccgcc                                                                                                                                                                                                                           <  2:448738‑M1/9‑1 (MQ=255)
                                               cgcgCACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAg                                                                                                                                                                                                                         <  1:504681/191‑1 (MQ=255)
                                                gcgcACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGgtgt                                                                                                                                                                                       >  2:488735/1‑223 (MQ=255)
                                                      agcacaTTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGgccg                                                                                                                                                                                                                             <  1:615673/180‑1 (MQ=255)
                                                        cacaTTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGc                                                                                                                                                                            <  2:590181/226‑1 (MQ=255)
                                                            ttGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGAt                                                                                                                                                              <  1:227227/236‑1 (MQ=255)
                                                                   ggTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCgg                                                                                                                                                                                           >  2:197080/1‑200 (MQ=255)
                                                                   ggTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTc                                                                                                                                                        >  1:740360/1‑235 (MQ=255)
                                                                     tGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCCGGATCATg                                                                                                                                                          >  2:633362/1‑231 (MQ=255)
                                                                      gggAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGcc                                                                                                                                                                                                            <  1:716184/181‑1 (MQ=255)
                                                                               gccgcaggacgtggagctgttcgaaggcaccatcgccgaaaacatcgcccgctttgccgaggtggacagcgacgcggtgatccgtgccgcccgcagcagcggtgtacacgacatgatcctgcgcttcccgcagggttacgacacccgcc                                                                                                                                                                                                                                   <  2:734098‑M1/1‑1 (MQ=255)
                                                                               gccgcaggacgtggagctgttcgaaggcaccatcgccgaaaacatcgcccgctttgccgaggtggacagcgacgcggtgatccgtgccgcccgcagcagcggtgtacacgacatgatcctgcgcttcccgcagggttacgacacccgcc                                                                                                                                                                                                                                   >  1:734099‑M1/149‑149 (MQ=255)
                                                                                caccacCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCa                                                                                                                                                                                                                          <  2:751561/157‑1 (MQ=255)
                                                                                  ccaccGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCGATGGCAGCCCATTGTCTGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGGTCATGTc                                                                                                                                                        >  2:658838/1‑220 (MQ=255)
                                                                                                   gCCTTGAGCTCGGCGAGGGCATCGACCAAGTCTTTTTCACCCCCGTCATCGAGTTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGc                                                                                                                                                                                             <  2:121028/166‑1 (MQ=255)
                                                                                                          gCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATc                                                                                                                                                             <  1:333783/191‑1 (MQ=255)
                                                                                                            tCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCATAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCt                                                                                                              <  1:197080/236‑1 (MQ=255)
                                                                                                                  aGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAAt                                                                                                                                                                                                                    <  2:374405/129‑1 (MQ=255)
                                                                                                                  aGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAAt                                                                                                                                                                                                                    >  1:374406/1‑129 (MQ=255)
                                                                                                                          gACCACGCCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGa                                                                                                                           <  2:713511/209‑1 (MQ=255)
                                                                                                                          gACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAgaagcaac                                                                                                                                                                                        <  1:72062/148‑8 (MQ=255)
                                                                                                                             cAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATc                                                                                                                                                                                                         <  1:267279/129‑1 (MQ=255)
                                                                                                                             cAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATc                                                                                                                                                                                                         >  2:267278/1‑129 (MQ=255)
                                                                                                                                               gTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGgt                                                                                                                                                                                         >  2:97698/1‑126 (MQ=255)
                                                                                                                                                              gTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGaa                                                                                                                                                                       >  1:204549/1‑129 (MQ=255)
                                                                                                                                                                     tCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCCGGCGGgggt                                                                                                                                                                                       >  2:152117/1‑106 (MQ=255)
                                                                                                                                                                                               gCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGCGATGt                                                                                    >  1:750757/1‑178 (MQ=255)
                                                                                                                                                                                                      tgcgcttcccgcagggttacgacacccgcCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTacac                                                                                                                                                <  2:678100‑M1/83‑1 (MQ=255)
                                                                                                                                                                                                           ttcccgcagggttacgacacccgcCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTgcgg                                                                                                                                     <  2:527318‑M1/94‑1 (MQ=255)
                                                                                                                                                                                                           ttcccgcagggttacgacacccgcCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTgcgg                                                                                                                                     >  1:527319‑M1/25‑118 (MQ=255)
                                                                                                                                                                                                           gcgGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCgctgct                                                                                                                                         <  1:675905/114‑1 (MQ=255)
                                                                                                                                                                                                           gcgGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCgctgct                                                                                                                                         >  2:675904/1‑114 (MQ=255)
                                                                                                                                                                                                            cgGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGc              >  1:500723/1‑236 (MQ=255)
                                                                                                                                                                                                                gcagggttacgacacccgcCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCtt           <  1:738447‑M1/216‑1 (MQ=255)
                                                                                                                                                                                                                ccAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTGCGGCGATg                                                                         >  2:589859/1‑173 (MQ=255)
                                                                                                                                                                                                                  aGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGt         >  1:554940/1‑235 (MQ=255)
                                                                                                                                                                                                                       gATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAg    >  1:464473/1‑235 (MQ=255)
                                                                                                                                                                                                                        aagCGTTGCTTCAGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTACCCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGc                                           <  1:169186/193‑1 (MQ=255)
                                                                                                                                                                                                                        aTGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGt  <  1:488736/236‑1 (MQ=255)
                                                                                                                                                                                                                              ggCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAg    <  1:28968/227‑1 (MQ=255)
                                                                                                                                                                                                                                 gcCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAg                                                                                                                                                                      <  2:496612‑M1/61‑1 (MQ=255)
                                                                                                                                                                                                                                  cCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAACGCGGGCGATGTTTTCGGCGATGGTGCCTTCg                                                                <  2:675260‑M1/163‑1 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                 
CCAAGCATGTGCACACCCCCGTCGCGCAGCATCAGTATCTGATCGACCGCGCACAGCACATTGGGCCGGTGGGAAATCAGCACCACCGTGGCGCCGCGTGCCTTGAGCTCGGCAAGGGCATCGACCAAGGCTTTTTCACCCACGTCATCGAGGTTGGCGTTGGGTTCGTCCAGCACCACCAGGTTGGGCTCGCCATACAGGGCGCGGGCCAGCGCGATGCGTTGCTTCTGGCCGCCAGACAATGGGCTGCCATCGGCGGCCAGGCGGGTGTCGTAACCCTGCGGGAAGCGCAGGATCATGTCGTGTACACCGCTGCTGCGGGCGGCACGGATCACCGCGTCGCTGTCCACCTCGGCAAAGCGGGCGATGTTTTCGGCGATGGTGCCTTCGAACAGCTCCACGTCCTGCGGCAGGTAGCCCAGCCACGGGCCCAGTTCGGCCTTGTTCCAGGT  >  AE015451/2908795‑2909246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.