New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4240151 =	41 (1.030)	4 (0.110)	3/312	NT	9.7%	coding (139/900 nt)	PP_3717	Transcriptional regulator, LuxR family
	?	AE015451	4240192 =	36 (0.970)					coding (98/900 nt)	PP_3717	Transcriptional regulator, LuxR family

TCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTGGCGCAGGGTCTCGACGATCTCGTCCACCTGC  >  AE015451/4239922‑4240376                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                  tCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGgcgc                                                                                                                                                                                                                              >  1:12577/1‑235 (MQ=255)             gtgatgtcgccaccgttgatcatcacccatgcgcaggtggacgagatcgtcgagaccctgcgccagtgcatcattgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgcg                                                                                                                                                                                                                             <  2:686569‑M1/7‑1 (MQ=255)                                        agcagGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACg                                                                                                                                                                                                                >  1:280645/1‑210 (MQ=255)                                        agcagGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACg                                                                                                                                                                                                                <  2:280644/210‑1 (MQ=255)                                                      gcTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCg                                                                                                                                                                           >  2:460292/1‑233 (MQ=255)                                                       cTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgggg                                                                                                                                                                        >  1:686570/1‑235 (MQ=255)                                                                   tCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCGGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCa                                                                                                                                                                                                   <  1:702958/196‑1 (MQ=255)                                                                            gcgGCCCGATGCCGTTCGGGGAGGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAgcgc                                                                                                                                                                                               <  2:494060/191‑1 (MQ=255)                                                                              gtgcatcattgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccaatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgcg                                                                                                                                                                                                                             >  1:704051‑M1/153‑159 (MQ=255)                                                                               gCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGc                                                                                                                                                <  1:530315/235‑1 (MQ=255)                                                                                cccGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGcc                                                                                                                                               >  1:449112/1‑235 (MQ=255)                                                                                        cGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTc                                                                                                                                       <  1:715260/235‑1 (MQ=255)                                                                                            ccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgcgc                                                                                                                                                                                                                            <  1:334415‑M1/8‑1 (MQ=255)                                                                                            ccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgcgcgc                                                                                                                                                                                                                            >  2:334414‑M1/139‑146 (MQ=255)                                                                                             ggggATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                                                                                                          >  2:439549/1‑227 (MQ=255)                                                                                                  gtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGCGCGCTg                                                                                                                                                                                                                          <  1:36070‑M1/10‑1 (MQ=255)                                                                                                          tGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGcc                                                                                                                     >  1:656862/1‑235 (MQ=255)                                                                                                             tACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                                                                                                   <  1:460293/218‑1 (MQ=255)                                                                                                                  cAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcgc                                                                                                                  >  1:416264/1‑230 (MQ=255)                                                                                                                   aaCTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGc                                                                                                           <  1:5922/236‑1 (MQ=255)                                                                                                                            gcccgcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACg                                                                                                                                                                                                                     <  1:5527/121‑1 (MQ=255)                                                                                                                              ccgcccCTGGAACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAg                                                                                                                                                                             <  2:408609/159‑1 (MQ=255)                                                                                                                                gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGga                                                                                                                                                                >  2:437270/1‑170 (MQ=255)                                                                                                                                gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCt                                                                                                        >  2:475718/1‑226 (MQ=255)                                                                                                                                  cccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGt                                                                                             <  1:449734/235‑1 (MQ=255)                                                                                                                                  cccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACAAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGagag                                                                                                                                                             >  1:237771/1‑171 (MQ=255)                                                                                                                                        cACTCAAGGCTAATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCACCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCACATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                                                                                                          >  2:693468/1‑184 (MQ=255)                                                                                                                                                       atcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAAc                                                                                                                                                                                                                      >  2:161268/1‑93 (MQ=255)                                                                                                                                                         catcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTC‑GGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAg                                                                                                                                                                                   <  2:204484/125‑1 (MQ=255)                                                                                                                                                                     cTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGt                                                           >  2:258602/1‑234 (MQ=255)                                                                                                                                                                      tGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCa                                                        <  1:493576/236‑1 (MQ=255)                                                                                                                                                                        cACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAc                                                       <  1:439550/235‑1 (MQ=255)                                                                                                                                                                          ccAACTGGCCGATGGCAGCGGCCACCTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGGGCTGCAACGCCACGGGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAg                                                                                                                                                                             <  2:29139/115‑1 (MQ=255)                                                                                                                                                                           cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCCGGCACGCCCGCGCACAGCCCtt                                                                                                       >  2:137283/1‑184 (MQ=255)                                                                                                                                                                                ggCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGa                                                             >  1:377774/1‑221 (MQ=255)                                                                                                                                                                                ggCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGGCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTCGTACAGGCCAAGCGCCGGGAgct                                                          >  1:124058/1‑222 (MQ=255)                                                                                                                                                                                         gggcatggcccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                                                                                                  >  2:598411‑M1/46‑47 (MQ=255)                                                                                                                                                                                         cAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAcgcgc                                                   <  2:263548/222‑1 (MQ=255)                                                                                                                                                                                           gCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCAc                                                       <  2:434668/216‑1 (MQ=255)                                                                                                                                                                                             ggCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCTCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                                                                                                            <  1:63688/145‑1 (MQ=255)                                                                                                                                                                                              gCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTg                                 <  1:91173/235‑1 (MQ=255)                                                                                                                                                                                                    aggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCCACGCCACGTGCcaccg                                                                                                                                                                                                        <  2:395432‑M1/28‑3 (MQ=255)                                                                                                                                                                                                    aggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                                                                                                            >  1:609505‑M1/35‑138 (MQ=255)                                                                                                                                                                                                    aggcctctcccgataccccgcttaccctcacaatGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAg                                                                                                                            <  2:609504‑M1/104‑1 (MQ=255)                                                                                                                                                                                                       gccAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCgcgc                                                                                                                <  2:187857/146‑1 (MQ=255)                                                                                                                                                                                                              cgataccccgcttaccctcacaatGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCacgcc                                                    <  1:48437‑M1/176‑2 (MQ=255)                                                                                                                                                                                                                  gggggTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcg                                                                                                                   >  2:279413/1‑133 (MQ=255)                                                                                                                                                                                                                  gggggTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCcg                                                                                                                   <  1:279414/133‑1 (MQ=255)                                                                                                                                                                                                                    gggTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTGGCGCAGGGTCTCGACGATCTCg           >  1:433265/1‑235 (MQ=255)                                                                                                                                                                                                                    gggTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTGGCGCAGGGTCTCGACGATCTCGt          >  1:198915/1‑236 (MQ=255)                                                                                                                                                                                                                             cATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTGGCGCAGGGTCTCGACGATCTCGTCCACCTgc  <  1:475719/235‑1 (MQ=255)                                                                                                                                                                                                                                   ccAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGa                                                             >  2:97713/1‑170 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                  TCGGCCAGGCCGCTTTGCACGGCAAGGCAGAAAGGGTCCAGCAGGTAGCCGGCGCTGAAATAGCGCTCCAGCACCGCGGCCCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTTGGTACAGGCCAAGCGCCGTGAGTTCACGCGCGGTCTCAATGATGCACTGGCGCAGGGTCTCGACGATCTCGTCCACCTGC  >  AE015451/4239922‑4240376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.