New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4375240 =	49 (1.230)	3 (0.080)	3/312	NT	6.2%	coding (60/264 nt)	PP_3850	conserved protein of unknown function
	?	AE015451	4375362 =	46 (1.240)					coding (174/258 nt)	PP_5637	conserved protein of unknown function

TGGCTGAGCGCTGAATGAGCAGAGGTAATCCTAGCAATCGATTACCCCCTGCAGCCTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGC  >  AE015451/4375006‑4375474                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                           atctttatacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGc                                                                                                                                                                                                                                           <  1:298576‑M1/2‑1 (MQ=255) atctttatacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGc                                                                                                                                                                                                                                           <  1:459174‑M1/2‑1 (MQ=255)   ctttatacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGcc                                                                                                                                                                                                                                          <  1:129356‑M1/3‑1 (MQ=255)   ctttatacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGcc                                                                                                                                                                                                                                          <  1:513740‑M1/3‑1 (MQ=255)   ctttatacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGc                                                                                                                                                                                                                                           <  2:273304‑M1/2‑1 (MQ=255)        tacagtattggtgccgcatgtacttccttctcgttcgacgccgcgagcatggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGccc                                                                                                                                                                                                                                         <  2:662422‑M1/4‑1 (MQ=255)                               cTAGCAATCGATTACCCCCTGCAGCCTAGATAACGATTCTTCCTCTTCATTTTCTAACAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAAccc                                                                                                                                                                                                             >  1:662423/1‑236 (MQ=255)                                      tCGATTACCCCCTGCAGCCTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGc                                                                                                                                                                                                         >  2:461714/1‑233 (MQ=255)                                         ttcgacgccgcgagcagggcgtggccttgccctcagaccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctactcctgggcccgacattatccctcggctgcacgatgcgaaggtcaacggcatgGCCCAGCTCg                                                                                                                                                                                                                                   >  2:721532‑M1/195‑204 (MQ=255)                                            aCCCCCTGCAGCCTAGATAACGATTCTTCCTCTGCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCgg                                                                                                                                                                                                          <  2:707288/226‑1 (MQ=255)                                                   gCAGCCTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCt                                                                                                                                                                                                <  1:279681/229‑1 (MQ=255)                                                      gCCTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCaa                                                                                                                                                                                                                          >  2:73860/1‑200 (MQ=255)                                                        cTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCGTTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGcacca                                                                                                                                                                                     <  1:460145/235‑1 (MQ=255)                                                        cTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGcacca                                                                                                                                                                                     <  1:665461/235‑1 (MQ=255)                                                           gATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGcaccaccac                                                                                                                                                                                 <  1:73860/236‑1 (MQ=255)                                                                         ctctTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCata                                                                                                                                                                      >  2:366147/1‑233 (MQ=255)                                                                              ccgcctacggaaagtccagcccctccgcgcggacgtccacattggcgaccatcacagcgagcctctgggtcgagtcgcgacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaccggcatgGCCCAg                                                                                                                                                                                                                                       <  2:185114‑M1/6‑1 (MQ=255)                                                                              cATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATAGAGCACGc                                                                                                                                                              >  1:245270/1‑236 (MQ=255)                                                                                  ttCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTc                                                                                                                                                          <  1:593096/236‑1 (MQ=255)                                                                                                acaGCCTGGCCGCCTCGGTAAGCTCGAGCATTTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGGCCAGCTCGGCCCACCAATCCCTCGGGACCCCGGcc                                                                                                                                                                                                        >  1:582737/1‑176 (MQ=255)                                                                                                 caGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGGCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGcaccacc                                                                                                                                                                                   <  1:4990/196‑1 (MQ=255)                                                                                                                    aGCGCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGccc                                                                                                                                                                                            <  2:433721/168‑1 (MQ=255)                                                                                                                         gAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGc                                                                                                                   <  1:341282/236‑1 (MQ=255)                                                                                                                           gCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGTGGAACCCCGGCCATCATTCTGCCCTGcac                                                                                                                                                                                       <  1:229997/166‑1 (MQ=255)                                                                                                                              cgTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGTACCACCACGACTGCGCATATAGCACGCCTTCGACCTGTTCTACCCCGTTGATGTTGATGCCGAGCTggg                                                                                                                    <  2:709242/229‑1 (MQ=255)                                                                                                                                     cAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCgttgatgttg                                                                                                                                 <  2:627247/210‑1 (MQ=255)                                                                                                                                        gTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGcaccaccac                                                                                                                                                                                 <  2:507929/159‑1 (MQ=255)                                                                                                                                           aTTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGccc                                                                                                                                                                                            <  2:555557/145‑1 (MQ=255)                                                                                                                                            ttGTCGTCGACATCATTGCGCCGACGACCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTc                                                                                                   <  2:518139/233‑1 (MQ=255)                                                                                                                                             tGTCGTCGACATCAGTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTg                                                                                                                                                                                          <  1:5763/145‑1 (MQ=255)                                                                                                                                              ctggttcgagtcgcaacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCAtt                                                                                                                                                                                                  >  2:191469‑M1/94‑136 (MQ=255)                                                                                                                                                    gACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCatat                                                                                                                                                                     <  1:231897/159‑1 (MQ=255)                                                                                                                                                    gACATCATTGCGCCGACGAGCCGCAGAGGCCATCACACTGAGCCCCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGccc                                                                                                                                                                                            <  2:28352/136‑1 (MQ=255)                                                                                                                                                     gcgtcgccacccaggcctgggtgtttaaccctacgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCcatc                                                                                                                                                                                                     >  2:201318‑M1/87‑126 (MQ=255)                                                                                                                                                      cctcatTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTAcc                                                                                                                                             <  2:199018/179‑1 (MQ=255)                                                                                                                                                            tGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTc                                                                                                                                                          <  2:125024/162‑1 (MQ=255)                                                                                                                                                             gcgcCGACGAGCCGCATAGGCCATCACACTGAGCCCCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTc                                                                                                                                                          <  2:204314/161‑1 (MQ=255)                                                                                                                                                                    cgaGCCGCATAGGCCAGCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACg                                                                                                                                                                                <  2:249403/132‑1 (MQ=255)                                                                                                                                                                      aGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCgg                                                                       <  1:729285/235‑1 (MQ=255)                                                                                                                                                                                gCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTa                                                            >  1:202619/1‑236 (MQ=255)                                                                                                                                                                                     acgcctgggcccgacattatcccccggctgcacgatgcgaaggtcaacggcatgGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCAGCATTCTGCCCTGcaccaccac                                                                                                                                                                                 <  1:553597‑M1/60‑1 (MQ=255)                                                                                                                                                                                        acTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCggg                                                                      >  2:513739/1‑218 (MQ=255)                                                                                                                                                                                        acTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGGTGATGTTGATGc                                                                                                                             >  2:61955/1‑163 (MQ=255)                                                                                                                                                                                              cACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGccc                                                                                                                                                                                                                                         >  1:410894/1‑49 (MQ=255)                                                                                                                                                                                              cACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGccc                                                                                                                                                                                                                                         <  2:410893/49‑1 (MQ=255)                                                                                                                                                                                               aCCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCg                                                                        <  1:714648/209‑1 (MQ=255)                                                                                                                                                                                               aCCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAg                                             <  1:694069/236‑1 (MQ=255)                                                                                                                                                                                                 cGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGc                                           >  1:273305/1‑236 (MQ=255)                                                                                                                                                                                                    aGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCt                                                                                                                                                            <  1:650896/120‑1 (MQ=255)                                                                                                                                                                                                    aGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCt                                                                                                                                                            >  2:650895/1‑120 (MQ=255)                                                                                                                                                                                                         gcCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTc                                    >  1:596075/1‑235 (MQ=255)                                                                                                                                                                                                           ccATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTcgc                                  >  1:723263/1‑235 (MQ=255)                                                                                                                                                                                                            cATCAGGATCGGTTACTAGGGCAACGTGGTCTACCAGCGCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAg                                                                 <  1:59361/203‑1 (MQ=255)                                                                                                                                                                                                                aGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGt                                                        <  2:660289/208‑1 (MQ=255)                                                                                                                                                                                                                        ttACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATAATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTcgcg                                 >  1:49300/1‑223 (MQ=255)                                                                                                                                                                                                                           cTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACg                                                                                                                                                                                >  1:682022/1‑77 (MQ=255)                                                                                                                                                                                                                           cTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACg                                                                                                                                                                                <  2:682021/77‑1 (MQ=255)                                                                                                                                                                                                                           cTAAGGCACCGTGTTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGTCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTc                                                                                                                                                          <  2:88043/99‑1 (MQ=255)                                                                                                                                                                                                                                gCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGcgaccac                                                                                                             <  1:460009/139‑7 (MQ=255)                                                                                                                                                                                                                                  caCGTGGCCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTggg                                                                                                                    <  2:162938/129‑1 (MQ=255)                                                                                                                                                                                                                                  aaCGTGGTCGCCCACCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCCCCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTCCCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCtgt           <  1:103647/235‑1 (MQ=255)                                                                                                                                                                                                                                     gTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCtgtg          >  2:459173/1‑233 (MQ=255)                                                                                                                                                                                                                                        gTCGCCCAGCCCGGCCAGCCAAGCCTGCGGACCCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGa         <  1:197017/231‑1 (MQ=255)                                                                                                                                                                                                                                          gGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTc                <  1:346145‑M1/221‑1 (MQ=255)                                                                                                                                                                                                                                           GCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGc  <  2:697835‑M1/235‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                           TGGCTGAGCGCTGAATGAGCAGAGGTAATCCTAGCAATCGATTACCCCCTGCAGCCTAGATAACGATTCTTCCTCTTCATTTTCTATCAGAGCCCACAGCCTGGCCGCCTCGGTAAGCTCGAGCATGTCGACCAGGTCATTGTCGTCGACATCATTGCGCCGACGAGCCGCATAGGCCATCACACTGAGCACCGCAGCGCGCCCATCAGGATCGGTTACTAGGGCAACGTGGTCGCCCAGCTCGGCCAGCCAAGCCTGCGGAACCCCGGCCATCATTCTGCCCTGCACCACCACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGC  >  AE015451/4375006‑4375474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.