New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4565258	35 (0.880)	4 (0.110)	4/320	NT	11.1%	coding (501/1560 nt)	glgA	glycogen synthase
	?	AE015451	= 4565305	31 (0.810)					coding (548/1560 nt)	glgA	glycogen synthase

ACATATCGTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAATACCCGAACATGCCATGCAGCAAGAAGGCATGGAATTCTACGGCAAGCTGTCGTTCCTCAAGGCC  >  AE015451/4565042‑4565492                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           aCATATCGTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACt                                                                                                                                                                                                                            <  2:613554/233‑1 (MQ=255)        gTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGa                                                                                                                                                                                                                                          >  2:286309/1‑212 (MQ=255)        gTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCg                                                                                                                                                                                                                    >  1:700962/1‑234 (MQ=255)        gTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGa                                                                                                                                                                                                                  <  1:238808/236‑1 (MQ=255)           ggTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGaa                                                                                                                                                                                                                 >  2:456256/1‑234 (MQ=255)                            tGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATc                                                                                                                                                                                                                                >  1:53448/1‑202 (MQ=255)                             gCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTg                                                                                                                                                                                             >  1:387851/1‑236 (MQ=255)                                          ccTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTg                                                                                                                                                                                <  1:286310/236‑1 (MQ=255)                                           cTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTgg                                                                                                                                                                               <  1:717034/236‑1 (MQ=255)                                                 gATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCAcgc                                                                                                                                                                                                      >  2:425464/1‑207 (MQ=255)                                                             ggACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgcc                                                                                                                                                                                          >  1:425465‑M2/1‑204 (MQ=255)                                                             ggACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACt                                                                                                                                                             <  1:456257/236‑1 (MQ=255)                                                              gACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACt                                                                                                                                                             <  1:384867/235‑1 (MQ=255)                                                                     taagagacagggtcatctatgtGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgccggccgcgatttcggcggcagccaggcccaggcgggc                                                                                                                                                      >  1:547025‑M2/11‑196 (MQ=255)                                                                            ccTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGCAGGCAAGATCCACTGGCCGCCGGAAGTGGCGCAcgcg                                                                                                                                                                                                     >  2:103514/1‑181 (MQ=255)                                                                                             tGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACCGGACCCCGGAAGTGGTGCACGCGCATGACTGgccggccgcg                                                                                                                                                                                   <  2:547024‑M2/182‑11 (MQ=255)                                                                                                  tGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACGGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCg                                                                                                                                                                                                                                           >  2:379032/1‑121 (MQ=255)                                                                                                               cccAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAgtgg                                                                                                                                                                                                             <  1:156534/137‑1 (MQ=255)                                                                                                                 cAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACAt                                                                                                                                                                  <  1:204230/179‑1 (MQ=255)                                                                                                                 cAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACAt                                                                                                                                                                  >  2:204230/1‑179 (MQ=255)                                                                                                                 cAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCa                                                                                                         >  1:655812/1‑236 (MQ=255)                                                                                                                 cAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCa                                                                                                         >  1:690706/1‑236 (MQ=255)                                                                                                                      cgACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGtt                                                                                                                                 >  2:450170/1‑207 (MQ=255)                                                                                                                              cacCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAg                                                                                             <  1:561339/235‑1 (MQ=255)                                                                                                                                      ggTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACCGCCGCGGCt                                                                                     >  1:681917/1‑235 (MQ=255)                                                                                                                                       gTGCCAACAATGGCCGCGACTGGCCCGACACCCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCt                                                                                                                                    <  1:103514/187‑1 (MQ=255)                                                                                                                                        tGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCTACCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCcac                                                                                                                       <  2:392809/199‑1 (MQ=255)                                                                                                                                             acaaTGGCCGCGACCGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCGACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACCACCTGGCGTACCAAGgtgg                                                                                                   >  2:403255/1‑213 (MQ=255)                                                                                                                                              caaTGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGc                                                                                                               >  1:99779/1‑201 (MQ=255)                                                                                                                                              caaTGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGccc                                                                              >  2:387714/1‑234 (MQ=255)                                                                                                                                              caaTGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCg                                                                             >  1:249465/1‑235 (MQ=255)                                                                                                                                                    ccGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACCGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTTGCGTGGCCTGaaga                                                                                                                                              >  2:716396/1‑162 (MQ=255)                                                                                                                                                         aCTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACg                                                                                                                                            <  1:202100/161‑1 (MQ=255)                                                                                                                                                                    aaCCACATCCGCTTCGCCCGCGTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgcc                                                                                                                                                                                          >  2:20807‑M2/1‑101 (MQ=255)                                                                                                                                                                       gccaTCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCa                                                                                                                                        <  2:536580/149‑1 (MQ=255)                                                                                                                                                                               cTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCcgc                                                                                         >  1:456241/1‑190 (MQ=255)                                                                                                                                                                                   gcccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCcagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcggcggcagccaggcccaggcgggcgaagcggatgtggttgtcgggccagtcgcggccattgttggcaccatagggtgtgccgtcgcgctggtacagttctgggcagatcaacacatagatgaccctgtctctta                                        >  1:547025‑M1/1‑39 (MQ=255)                                                                                                                                                                                   gcccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgccggccgcgatttcggcggcagccaggccc                                                                                                                                                              >  2:581337‑M2/1‑86 (MQ=255)                                                                                                                                                                                   gcccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAATACCCGAACATGCCATGCAGCaagaag                                        <  1:387715/235‑1 (MQ=255)                                                                                                                                                                                    cccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCcagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgcc                                                                                                                                                                                          <  1:394282‑M1/88‑51 (MQ=255)                                                                                                                                                                                    cccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCcagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgcc                                                                                                                                                                                          >  2:394281‑M1/1‑38 (MQ=255)                                                                                                                                                                                    cccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCt                                                                                                                                                   <  1:230485/127‑1 (MQ=255)                                                                                                                                                                                    cccgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAATAccc                                                              >  2:32357/1‑212 (MQ=255)                                                                                                                                                                                      cgccTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTTCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAAt                                                                  <  2:426158/206‑1 (MQ=255)                                                                                                                                                                                           gggcctggCTGCCGCCGAAATCGCGGCCGGCcagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcggcggcagccaggcccaggcgggc                                                                                                                                                      >  2:581337‑M1/1‑31 (MQ=255)                                                                                                                                                                                                     gccgccGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCaa                                                                   <  2:456240/190‑1 (MQ=255)                                                                                                                                                                                                          cgAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgcc                                                                                                                                                                                          <  2:161759‑M2/66‑4 (MQ=255)                                                                                                                                                                                                          cgAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgcc                                                                                                                                                                                          >  1:161759‑M2/1‑63 (MQ=255)                                                                                                                                                                                                                cgcgGCCGGCcagtcatgcgcgtgcaccacttccggggtccggtggatcttgccttcgccggccgcgatttcggcggcagccaggcccaggcgggcgaagcggatgtggttgtcgggccagtcgcggccattgttggcaccatagggtgtgccgtcgcgctggtacagttctgggcagatca                                                                <  2:547024‑M1/182‑173 (MQ=255)                                                                                                                                                                                                                       ggccagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcggcggcagccaggcccaggcgggcgaagcggatgtggttgtcgggccagtcgcggccattgttggcaccatagggtgtgccgtcgcgctggtacagttctgggcagatcaacacatagatgaccaggccgtcggccatgtcc                                >  1:425465‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                       ggccagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcggcggcagccaggcccacgcgggcgaagcggatgtggtt                                                                                                                                       >  2:20807‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                       ggccagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcg                                                                                                                                                                             <  2:161759‑M1/66‑64 (MQ=255)                                                                                                                                                                                                                       ggccagtcatgcgcgtgcaccacttccggcgtccagtggatcttgccttcgccggccgcgatttcg                                                                                                                                                                             >  1:161759‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                       ggcGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgccggccgcgatttcggcggcagccaggcccaggcggg                                                                                                                                                       >  2:394281‑M2/1‑50 (MQ=255)                                                                                                                                                                                                                       ggcGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGgccggccgcgatttcggcggcagccaggcccaggcggg                                                                                                                                                       <  1:394282‑M2/88‑39 (MQ=255)                                                                                                                                                                                                                        gcGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAATACCCGAACATGCCATGCAGCAAGAAGGCATGGAATTCTACGGCAAGCTGTCGTTCCTCAAggcc  <  1:437134/236‑1 (MQ=255)                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           ACATATCGTGGGTGAACTGGGCGGCCATGCGGCCCTGCCGCCCTGCAAGATCGGGCGCATGGACATGGCCGACGGCCTGGTCATCTATGTGTTGATCTGCCCAGAACTGTACCAGCGCGACGGCACACCCTATGGTGCCAACAATGGCCGCGACTGGCCCGACAACCACATCCGCTTCGCCCGCCTGGGCCTGGCTGCCGCCGAAATCGCGGCCGGCGAAGGCAAGATCCACTGGACGCCGGAAGTGGTGCACGCGCATGACTGGCCGGCCGGCCTGGCCCCGGCCTACATGCACTGGCGTGGCCTGAATACGCCCACGCTGTTCACCATCCACAACCTGGCGTACCAAGGTGTGTACAGCCGCGGCTGCAGCCCGGAGCTGGCAATACCCGAACATGCCATGCAGCAAGAAGGCATGGAATTCTACGGCAAGCTGTCGTTCCTCAAGGCC  >  AE015451/4565042‑4565492

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.