New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 514686 =38 (0.950)3 (0.080) 3/318 NT 7.1% coding (398/1041 nt) PP_0426 conserved membrane protein of unknown function
?AE015451 515222 = 43 (1.140)coding (520/648 nt) coq 2‑nonaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol hydroxylase

AATGCCAACAGGCTTTGGTCCTGGCCTGGTTGGAGAATGCCTGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCACCAGGCCAGGTG  >  AE015451/514995‑515453
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                       
aaTGCCAACAGGCTTTGGTCCTGGCCTGGTTGGAGAATGCCTGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCga                                                                                                                                                                                                                                 <  1:596843/236‑1 (MQ=255)
           gCTTTGGTCCTGGCCTGGTTGGAGAATGCCTGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGGGAATGGCCCg                                                                                                                                                                                                                       <  1:352531/235‑1 (MQ=255)
                               ggAGAATGCCTGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCg                                                                                                                                                                                                   <  1:486919/235‑1 (MQ=255)
                                         tGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGACGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCAGGGATGTTTCCTCTTCGTGCTGGAGCTGCTcc                                                                                                                                                                                        >  1:75452/1‑236 (MQ=255)
                                                  ggCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCtcg                                                                                                                                                                               >  1:165624/1‑236 (MQ=255)
                                                      cgcgcCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATg                                                                                                                                                                                                                            <  1:752215/187‑1 (MQ=255)
                                                         gcCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGt                                                                                                                                                                        >  1:42527/1‑236 (MQ=255)
                                                              gTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAACGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCtt                                                                                                                                                                    <  1:405602/235‑1 (MQ=255)
                                                                         cGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCtcg                                                                                                                                                                               <  1:44913/213‑1 (MQ=255)
                                                                           aaTCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCtt                                                                                                                                                                    <  2:458542/222‑1 (MQ=255)
                                                                              cGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCg                                                                                                                                                    >  1:411693/1‑235 (MQ=255)
                                                                               gATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCg                                                                                                                                                                                                       <  2:103175/183‑1 (MQ=255)
                                                                                   cGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCt                                                                                                                                                                     <  1:394506/213‑1 (MQ=255)
                                                                                     gcATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCtcgtcg                                                                                                                                                                            <  1:540455/203‑1 (MQ=255)
                                                                                        ccttgttcgccctccatctgcaacgccgcgtccagcccgtcgctgctggcgtgctggcagcagtagccgtcagcatcgtgccgctggcggtattcgctatcgaacgcatgctcggctggtggccactggacgatgcgcaTCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAgcggc                                                                                                                                            <  1:275477‑M2/94‑1 (MQ=255)
                                                                                          gCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGt                                                                                                                                                                                    <  1:483387/191‑1 (MQ=255)
                                                                                                  ttCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAg                                                                                                                                     >  1:457568/1‑230 (MQ=255)
                                                                                                  ttCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAgg                                                                                                                               >  1:654848/1‑236 (MQ=255)
                                                                                                                gtgCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGa                                                                                                                           <  1:650173/226‑1 (MQ=255)
                                                                                                                      ttGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGc                                                                                                                  >  1:560025/1‑229 (MQ=255)
                                                                                                                        ggTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAgg                                                                                                                               >  2:355879/1‑214 (MQ=255)
                                                                                                                          tCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTc                                                                                                                                                     >  1:178883/1‑190 (MQ=255)
                                                                                                                          tCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGc                                                                                                                  >  2:658572/1‑225 (MQ=255)
                                                                                                                              gACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCTGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGAt                                                                                                                                                                                                                   >  1:486017/1‑124 (MQ=255)
                                                                                                                                     gCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGATAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTg                                                                                                <  1:518843/232‑1 (MQ=255)
                                                                                                                                            aGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGCAGCCCAGGCTGACCtt                                                                                                                       >  2:159161/1‑202 (MQ=255)
                                                                                                                                             gCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTa                                                                                                                                                 >  1:702903/1‑175 (MQ=255)
                                                                                                                                             gCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGa                                                                                    >  1:127747/1‑236 (MQ=255)
                                                                                                                                                cATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACg                                                                                 <  1:667845/236‑1 (MQ=255)
                                                                                                                                                 aTGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACg                                                                                 <  1:128007/235‑1 (MQ=255)
                                                                                                                                                  tGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACg                                                                                 <  2:266001/234‑1 (MQ=255)
                                                                                                                                                  tGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTGCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGAc                                                                               <  1:370352/236‑1 (MQ=255)
                                                                                                                                                     cAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATg                                                                            <  1:589116/236‑1 (MQ=255)
                                                                                                                                                                     cGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACaga                                                                <  1:339704/232‑1 (MQ=255)
                                                                                                                                                                                   caccGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCg                                                <  2:654847/234‑1 (MQ=255)
                                                                                                                                                                                     ccGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACg                                                                                 <  2:313489/199‑1 (MQ=255)
                                                                                                                                                                                          ttCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCAGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACACAGGGTTGAGCACGCTCGGGTGGCt                                         <  2:702902/234‑1 (MQ=255)
                                                                                                                                                                                               gggCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTGTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGccc                                                                                                        <  2:11248/164‑1 (MQ=255)
                                                                                                                                                                                               acgcatgctcggctggtggccactggacgatgcgcaTCTGCTCGAGAATGGCCCGGGATTTTTCAt                                                                                                                                                                                                            >  2:610598‑M2/37‑66 (MQ=255)
                                                                                                                                                                                               acgcatgctcggctggtggccactggacgatgcgcaTCTGCTCGAGAATGGCCCGGGATTTTTCAt                                                                                                                                                                                                            <  1:610599‑M2/30‑1 (MQ=255)
                                                                                                                                                                                                 gCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGc                                                                                                     <  2:331090/167‑1 (MQ=255)
                                                                                                                                                                                                        cGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGc                                                                           >  2:20156/1‑186 (MQ=255)
                                                                                                                                                                                                        cGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGc                                                                           <  1:20156/186‑1 (MQ=255)
                                                                                                                                                                                                             tGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGTTGACCAGCCCGGCCAGTgcgc                                                                                             >  2:747202/1‑163 (MQ=255)
                                                                                                                                                                                                             tGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTg                    >  1:701490/1‑236 (MQ=255)
                                                                                                                                                                                                             tGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGAACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACg                                                                                 <  1:189399/175‑1 (MQ=255)
                                                                                                                                                                                                                        gtcgATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCAcca           >  2:260339/1‑234 (MQ=255)
                                                                                                                                                                                                                        gtcgATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCAcc            <  2:701489/233‑1 (MQ=255)
                                                                                                                                                                                                                          cgatgcgcaTCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTATTCGCAccaggcc       <  1:513496‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                          cgatgcgcaTCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGAACACCTGATGTTCGGTCGCGGCGACGAAGCCCAGGCTGACCTTGTCg                                                                                                                   >  2:189399‑M2/10‑128 (MQ=255)
                                                                                                                                                                                                                               cgcaTCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCGCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCACCAGGCCAGGt   >  1:628133‑M2/5‑235 (MQ=255)
                                                                                                                                                                                                                                gcaGCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCACCAGGCCAGGTg  <  1:514995‑M2/232‑1 (MQ=255)
                                                                                                                                                                                                                                  aTCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATg                                                                            <  2:165624‑M2/158‑1 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                       
AATGCCAACAGGCTTTGGTCCTGGCCTGGTTGGAGAATGCCTGCTTGCACGGCGCGCGCCAGGTCCTTGGCGTCGAATCGATCCGTCATGGCGATGCCTTCAGATGCGGTATGTGCTCTTGGTCATGACCTTGGCCAGCAAGCTCATGCCAAAGCGGACGGGGGCCGGGAAGCGATAACCACCGGCTTCCAGTGCAGACTCGGCGTGCTGTTCTTCGTCGATGCGCATCTGCTCGAGAATGGCCCGGGATTTTTCATCTTCGTGCGGGAGCTGCTCCAGGTGCTCGTCGAGGTGCTTGCACACCTGATGTTCGGTAGCGGCGACGAAGCCCAGGCTGACCTTGTCGCTGACCAGCCCGGCCAGTGCGCCAATGCCGAACGACATGCCGTAGAACAGAGGGTTGAGCACGCTCGGGTGGCTGTTCAGCTGGCGAATGCGCTGTTCGCACCAGGCCAGGTG  >  AE015451/514995‑515453

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.