New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2020506	38 (0.950)	3 (0.080)	3/326	NT	7.3%	coding (459/1416 nt)	PP_1798	Outer membrane efflux protein
	?	AE015451	= 2020515	39 (1.010)					coding (468/1416 nt)	PP_1798	Outer membrane efflux protein

CAGCCGCATCCTGCGCAAGAACGAGGCTGAGCGCGACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGATCGTCGGGCGGCCGATTACC  >  AE015451/2020314‑2020743                                                                                                                                                                                                          |                                                                                                                                                                                                                                     cAGCCGCATCCTGCGCAAGAACGAGGCTGAGCGCGACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGt                                                                                                                                                                                                      >  2:285327/1‑234 (MQ=255)    ccGCATCCTGCGCAAGAACGAGGCTGAGCGCGACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTg                                                                                                                                                                                                              <  1:536208/223‑1 (MQ=255)                cAAGAACGAGGCTGAGCGCGACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGcc                                                                                                                                                                                        <  2:271665/233‑1 (MQ=255)                                 gcgACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGACAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGgacga                                                                                                                                                                                                                     >  2:219469/1‑187 (MQ=255)                                      ctctATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGacgacg                                                                                                                                                                                                                   <  1:50704/184‑1 (MQ=255)                                       tctATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGgcgcttggcgaggtcgactgtagcctctgccagcgtgtcttcagcttcatgacctttttgatccttcacgct                                                                                                                                                              >  1:483755‑M2/1‑164 (MQ=255)                                        ctATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATcgc                                                                                                                                                              >  1:190005/1‑235 (MQ=255)                                             acacCGAAACCTATTCGCTCAGGCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTcag                                                                                                                                                         <  2:190005/235‑1 (MQ=255)                                                    aaCCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGgcgcttggcgaggtcgactgtagcctctgccagcgtgtcttcagcttcatgacgtttttgatcc                                                                                                                                                                      <  2:483754‑M2/215‑65 (MQ=255)                                                    aaCCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCt                                                                                                                                                                                               >  2:84313/1‑190 (MQ=255)                                                    aaCCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAgcagca                                                                                                                                                    >  2:472342/1‑233 (MQ=255)                                                    aaCCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCATGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAACGCTACTTCGTGGCGCTGGCTGCg                                                                                                                                                                                                                          >  2:315115/1‑163 (MQ=255)                                                      ccTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTc                                                                                                                                               >  1:211760/1‑236 (MQ=255)                                                      ccTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCGGGCAGAAGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGgc                                                                                                                                                                                                                                    <  2:703877‑M2/151‑3 (MQ=255)                                                                                cTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGCGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCggcc                                                                                                                                                                                                                       >  2:117382/1‑136 (MQ=255)                                                                                cTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAAc                                                                                                                                                                                 >  1:42649/1‑176 (MQ=255)                                                                                cTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCaaaa                                                                                                                                                                           >  2:688074/1‑182 (MQ=255)                                                                                cTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCa                                                                                                                         >  1:689539/1‑232 (MQ=255)                                                                                cTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTGCGAACGGCAGATGGccga                                                                                                                              >  1:122583/1‑225 (MQ=255)                                                                                          agccagccTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGgc                                                                                                                                                                                                            >  2:351237/1‑139 (MQ=255)                                                                                              agccTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAAcc                                                                                                                                                                                >  2:341039/1‑163 (MQ=255)                                                                                              agccTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATg                                                                                                        >  1:484936/1‑235 (MQ=255)                                                                                                      aGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCAc                                                                                                 <  1:84313/234‑1 (MQ=255)                                                                                                                      cAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGc                                                                                                       >  1:541670/1‑212 (MQ=255)                                                                                                                        agagCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGAATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTttgcttgc                                                                              >  1:66226/1‑235 (MQ=255)                                                                                                                         gagCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAACAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCt                                                                                                               >  2:85163/1‑201 (MQ=255)                                                                                                                                 aGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTc                                                                                                              >  2:495712/1‑194 (MQ=255)                                                                                                                                 aGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCaaga                                                                        >  2:389483/1‑232 (MQ=255)                                                                                                                                 aGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTAGACCTCGCCAAGCGATAATTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGGCggg                                                                                                                                                                                     >  2:140151/1‑123 (MQ=255)                                                                                                                                           aGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCa                                                          <  1:495713/236‑1 (MQ=255)                                                                                                                                              tCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGgcgcttggcgaggtcgactgtagcctctgccagcctgtcttcagcttcatgacctttttgatccttcacgctcttggacttctggtagcgctcccaggctggcttgttgtacag                                                                                                                    >  2:413852‑M2/1‑61 (MQ=255)                                                                                                                                                aTGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAg                                                     >  1:192158/1‑236 (MQ=255)                                                                                                                                                 tGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAg                                                     >  1:298166/1‑235 (MQ=255)                                                                                                                                                            acacGCTGGCAGAGGCTACAGTCGACCTCGCCAACCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGCGCGCCGGGCAACCCAAAAAAACCTTGATcgcg                                                                                                                                                             <  2:555681/120‑1 (MQ=255)                                                                                                                                                                 cTGGCAGAGGCTACAGTAGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTttgcttgc                                                                              <  2:697517/194‑1 (MQ=255)                                                                                                                                                                   ggCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAg                                   <  1:637379/235‑1 (MQ=255)                                                                                                                                                                      agagGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCcg                                       >  1:748411/1‑228 (MQ=255)                                                                                                                                                                      agagGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGGAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCAt                               >  1:149733/1‑236 (MQ=255)                                                                                                                                                                               aGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCgaga                      >  1:163848/1‑236 (MQ=255)                                                                                                                                                                                     ccTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGAtcgtc                 <  1:285328/235‑1 (MQ=255)                                                                                                                                                                                       tCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGATCGTCgg               >  1:393748/1‑235 (MQ=255)                                                                                                                                                                                       tCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGCAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAggg                                                   >  2:233291/1‑198 (MQ=255)                                                                                                                                                                                                    cTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGATCGTCGGGCGGCCGATTAcc  >  1:372249/1‑235 (MQ=255)                                                                                                                                                                                                      tCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGATCGTCGGGCGGCCGATTAcc  >  2:584774/1‑233 (MQ=255)                                                                                                                                                                                                          |                                                                                                                                                                                                                                     CAGCCGCATCCTGCGCAAGAACGAGGCTGAGCGCGACCTCTATAACACCGAAACCTATTCGCTCAGTCTCACCCAGTACCTGTACAACAAGCCAGCCTGGGAGCGCTACCAGAAGTCCAAGAGCGTGAAGGATCAAAAAGGTCATGAAGCTGAAGACACGCTGGCAGAGGCTACAGTCGACCTCGCCAAGCGCTACTTCGTGGCGCTGGCTGCGGACGACGAGCTGGCGCTGGTGCAGGCTGAGCGCCGGGCAACCCAAAAAAACCTTGATCGCGTCAGCAGCATGTTCGAACGGCAGATGGCCAAAATCACCGACAAGCTCGACATGCAGGCACGGGTAGATTTTTTGCTTGCGCAAGAAGTGGAAGCGCGCAATCAGGTGCAAGTAAGCCGCGAGGCATTGGCCGAGATCGTCGGGCGGCCGATTACC  >  AE015451/2020314‑2020743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.