New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2054713 =	50 (1.250)	3 (0.080)	3/310	NT	6.2%	intergenic (‑88/‑147)	PP_1829/aroC	Hydrolase, alpha/beta fold family/Chorismate synthase
	?	AE015451	2054775 =	44 (1.190)					intergenic (‑150/‑85)	PP_1829/aroC	Hydrolase, alpha/beta fold family/Chorismate synthase

GATCGGGCGTTGCAGTACAGTGGGGGCGGCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCC  >  AE015451/2054542‑2055008                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          gATCGGGCGTTGCAGTACAGTGGGGGCGGCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTAc                                                                                                                                                                                                                                         >  1:150145/1‑236 (MQ=255)    cGGGCGTTGCAGTACAGTGGGGGCGGCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCcg                                                                                                                                                                                                                                      >  1:715123/1‑236 (MQ=255)                  cAGTGGGGGCGGCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGCTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTa                                                                                                                                                                                                                                          <  1:468356/218‑1 (MQ=255)                                                   acaGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCAccc                                                                                                                                                                                                              <  2:605099/213‑1 (MQ=255)                                                   acaGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCAccc                                                                                                                                                                                                              >  1:605100/1‑213 (MQ=255)                                                             gagCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCcgc                                                                                                                                                                                                                                     >  1:116649/1‑180 (MQ=255)                                                             gagCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCcgc                                                                                                                                                                                                                                     <  2:116649/180‑1 (MQ=255)                                                                       tcAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGGGGGTTTGACCCAATGGTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCAccc                                                                                                                                                                                                              <  2:188665/192‑1 (MQ=255)                                                                           ggCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATActgctg                                                                                                                                                                                           >  1:325412/1‑208 (MQ=255)                                                                                                 cATGGGGGGGTGTGGGTTTGGCCCAAGGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTcc                                                                                                                                                       <  2:715122/222‑1 (MQ=255)                                                                                                 cATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAAt                                                                                                                                           >  2:476762/1‑234 (MQ=255)                                                                                                         ggTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCg                                                                                                                                                                                     >  2:381511/1‑184 (MQ=255)                                                                                                         ggTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACg                                                                                                                                    >  2:641511/1‑233 (MQ=255)                                                                                                         ggTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACg                                                                                                                                    >  2:706371/1‑233 (MQ=255)                                                                                                         ggTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTGTACCCGCGAag                                                                                                                                                                                                                                 >  2:599774/1‑140 (MQ=255)                                                                                                           tgtgGTTTTTACCCACTGTTGGCGGGAATGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATActgct                                                                                                                                                                                            <  1:45310/175‑1 (MQ=255)                                                                                                              gggTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCa                                                                                                                                 >  2:85367/1‑231 (MQ=255)                                                                                                              gggTTTGACCCAATGTTTGCGGGAAGGCTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTg                                                                                                                            >  1:450983/1‑236 (MQ=255)                                                                                                                       ccAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTcgcg                                                                                                                                                               >  2:35016/1‑192 (MQ=255)                                                                                                                        cAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGt                                                                                                                    >  2:396906/1‑234 (MQ=255)                                                                                                                           tGTTTGCGGGAAGGGTCTATGCGGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAAc                                                                                                                                                                    <  2:502294/183‑1 (MQ=255)                                                                                                                            gTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTcaccac                                                                                                              >  1:546365/1‑236 (MQ=255)                                                                                                                                   ggAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAAc                                                                                                                                                                                                           <  2:506649/136‑1 (MQ=255)                                                                                                                                          tCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTc                                                                                                                                                                  <  2:305845/170‑1 (MQ=255)                                                                                                                                          tCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTg                                                                                                         >  2:395544/1‑227 (MQ=255)                                                                                                                                                      aggTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGt                                                                                    >  1:254207/1‑236 (MQ=255)                                                                                                                                                      aggTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGt                                                                                    >  1:337999/1‑236 (MQ=255)                                                                                                                                                        gTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGtt                                                                                   <  1:476763/235‑1 (MQ=255)                                                                                                                                                           tGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGt                                                                                >  1:429880/1‑235 (MQ=255)                                                                                                                                                            ggCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCg                                                                              <  1:85367/236‑1 (MQ=255)                                                                                                                                                                cTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGc                                                                                                                                                           >  2:366938/1‑155 (MQ=255)                                                                                                                                                                cTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTca                                                                                                                  >  2:438759/1‑196 (MQ=255)                                                                                                                                                                cTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCa                                                                           >  1:704603/1‑235 (MQ=255)                                                                                                                                                                     gcgGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAaga                                                                                                                                                                                                                                >  2:623069/1‑81 (MQ=255)                                                                                                                                                                               CCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGcc                                                            >  1:692128‑M1/1‑235 (MQ=255)                                                                                                                                                                                                gCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAAt                                                                                                                                           <  2:94277/139‑1 (MQ=255)                                                                                                                                                                                                gCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAAt                                                                                                                                           >  1:94277/1‑139 (MQ=255)                                                                                                                                                                                                gCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCg                                                                                                      >  2:563382/1‑176 (MQ=255)                                                                                                                                                                                                gCACACCATTGGAACCTGGTAGTGAGCGAGTAGGAGCGGGTTTACCCGCGAAGAGGTTAGCACAGCCCACCCAAATATCTGTATACTGCTGCTTTGGTCCAttt                                                                                                                                                                              >  2:279538/1‑104 (MQ=25)                                                                                                                                                                                                  acacCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCCTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGc                                                                                                                                  >  2:570477/1‑146 (MQ=255)                                                                                                                                                                                                    caggttccaatggtgtgcagcccccgtaggagcgggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCt                                                                                                                                                                                                      >  2:630076‑M2/39‑76 (MQ=255)                                                                                                                                                                                                    caggttacaatggtgtgcagcccccgtaggagcgggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCt                                                                                                                                                                                                      <  1:630077‑M2/38‑1 (MQ=255)                                                                                                                                                                                                    acCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTgg                                                >  1:648307/1‑226 (MQ=255)                                                                                                                                                                                                    acCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTccc                                       <  1:706372/235‑1 (MQ=255)                                                                                                                                                                                                    acCATTGGAACCTGGTGGTGACCGTGTAAGACCGGGTTTACCCGCGGAGAGGCCAGCACAGGGCAcc                                                                                                                                                                                                               >  2:296779/1‑67 (MQ=255)                                                                                                                                                                                                     aggttccaatggtgtgcagcccccgtaggagcgggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGc                                                    >  1:427103‑M2/38‑221 (MQ=255)                                                                                                                                                                                                                   tggtgACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAAc                                                                                                                                                                                                           >  2:655576/1‑56 (MQ=255)                                                                                                                                                                                                                   tggtgACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAAc                                                                                                                                                                                                           <  1:655577/56‑1 (MQ=255)                                                                                                                                                                                                                   tggtgACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTc                                         >  1:395167/1‑218 (MQ=255)                                                                                                                                                                                                                   tggtgACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTAGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTAGCCATTGTCGATGGATGCCCACCGGGCCTg                                                 >  2:404287/1‑210 (MQ=255)                                                                                                                                                                                                                               tggagcgggttTACCCGCGAAGAGGCCAGTACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGc                                                                                                                                  <  1:410555‑M2/106‑1 (MQ=255)                                                                                                                                                                                                                               aggagcgggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGc                                                                                                                                  >  2:410554‑M2/12‑117 (MQ=255)                                                                                                                                                                                                                                ggagcgggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGACATTTCCCTCGCCGACCTGCAGCACGACCTTGACCgg          >  1:108976‑M2/11‑236 (MQ=255)                                                                                                                                                                                                                                ggagcgggttCACCCGCGAAAGGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCACGCTGTTCACTGTCACCACCg                                                                                                            >  2:82522‑M2/11‑138 (MQ=255)                                                                                                                                                                                                                                      ggttTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCCGAACTCGCGGAGCGTCCATGTCCg                                                                                                                                                <  2:409515‑M2/92‑1 (MQ=255)                                                                                                                                                                                                                                         tTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCt                 >  2:566245‑M2/2‑220 (MQ=255)                                                                                                                                                                                                                                         tTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGcc  >  1:685467‑M2/2‑235 (MQ=255)                                                                                                                                                                                                                                         tTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGcc  >  1:305600‑M2/2‑235 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          GATCGGGCGTTGCAGTACAGTGGGGGCGGCGGCCTGGGCCAGGCCAGTGCACAGCAGGAAGAGCAAGGCGACAAGGCGCGACATCATGCGGTACTACATGGGGAGGTGTGGGTTTGACCCAATGTTTGCGGGAAGGTTCTATGCAGGGCAGGTCTGGCCCTTTCGCGGGTGAACCCGCTCCTACGGGGGCTGCACACCATTGGAACCTGGTGGTGACCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCCACCCAACCATCTGTATACTGCTGCTTTCGTCCATTTCAGGCAGAACTCGCGGAGCGTCCATGTCCGGCAATACCTACGGCAAGCTGTTCACTGTCACCACCGCTGGCGAGAGCCATGGCCCGGCGTTGGTCGCCATTGTCGATGGATGCCCACCGGGCCTGGAAATTTCCCTCGCCGACCTGCAGCACGACCTTGACCGGCGCAAGCC  >  AE015451/2054542‑2055008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.