New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2321086 =	44 (1.100)	4 (0.110)	4/304	NT	9.3%	coding (155/945 nt)	PP_2041	Transcriptional regulator, LysR family
	?	AE015451	2321102 =	38 (1.050)					coding (139/945 nt)	PP_2041	Transcriptional regulator, LysR family

CCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTATTTGTTCAGCC  >  AE015451/2320884‑2321302                                                                                                                                                                                                                           |                                                                                                                                                                                                         ccccGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCg                                                                                                                                                                                          <  1:413686/235‑1 (MQ=255)   ccGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTc                                                                                                                                                                                           >  1:583941/1‑232 (MQ=255)         aGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGctct                                                                                                                                                                                      <  2:583940/231‑1 (MQ=255)                ctgggcctgggTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCCGTTCGATACCGACATGCTGGCGCGCCCGCAGTTGCAtt                                                                                                                                                                                                   >  1:8905/1‑211 (MQ=255)                  gggcctgggTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATc                                                                                                                                                                        <  1:276178/236‑1 (MQ=255)                   ggcctgggTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATc                                                                                                                                                                        <  1:635923/235‑1 (MQ=255)                    gcctgggTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATc                                                                                                                                                                        <  2:576693/234‑1 (MQ=255)                           tAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCCGTTCGATACCGTCATGCTGGCGCGCCCGCCGTTGCCTTTCCCGTTc                                                                                                                                                                                           >  2:504862/1‑208 (MQ=255)                                  ggCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTc                                                                                                                                                               <  1:751112/229‑1 (MQ=255)                                      ggCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTc                                                                                                                                                                                                 >  2:717878/1‑191 (MQ=255)                                       gCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTg                                                                                                                                                    >  1:553482/1‑235 (MQ=255)                                                    ctgagaaccacaatgactttgaaacagctgcgttatttgatcgccattgtcgaagccggcagtttttccaatgccgcacgccaggcgttcatcgcccaaccggccttgagccgacagataggcctgctggagagcgaactggaaatgcaacTGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCaa                                                                                                                                                             >  1:746945‑M1/152‑213 (MQ=255)                                                    ctgagaaccacaatgactttgaaacagctgcgttatttgatcgccattgtcgaagccggcagtttttccaatgccgcacgccaggcgttcatcgcccaaccggccttgagccgacagataggcctgctggagagcgaactggaaatgcaacTGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCaa                                                                                                                                                             <  2:746944‑M1/62‑1 (MQ=255)                                                                atgactttgaaacagctgcgttatttgatcgccattgtcgaagccggcagtttttccaatgccgcacgccaggcgttcatcgcccaaccggccttgagccgacagataggcctgctggagagcgaactggaaatgcaacTGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCca                                                                                                                                                                                   <  1:359631‑M1/40‑1 (MQ=255)                                                                             gCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGcc                                                                                                             >  1:431433/1‑236 (MQ=255)                                                                                aCGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGCTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCgg                                                                                                           >  1:466250/1‑235 (MQ=255)                                                                                          tGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCCGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCg                                                                                                                                                >  2:192677/1‑188 (MQ=255)                                                                                                   cgcgGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCaaa                                                                                       >  1:545722/1‑236 (MQ=255)                                                                                                                  tttttccaatgccgcacgccaggcgttcatcgcccaaccggccttgagccgacagataggcctgctggagagcgaactggaaatgcaacTGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGc                                                                                                                                   >  2:359630‑M1/90‑177 (MQ=255)                                                                                                                         tttCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGACTGGCGTGCGGCATTGGAAAAACTGCCCGCTTCGACAATGGCGAGCAAATaa                                                                                    >  1:695819/1‑217 (MQ=255)                                                                                                                           tCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGCCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCa                                                                                >  2:644238/1‑219 (MQ=255)                                                                                                                                   gccaggcgttcatcgcccaaccggccttgagccgacagataggcctgctggagagcgaactggaaatgcaactgctggcgcgccagcaGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGaaaaa                                                                                                                  >  2:359630‑M2/89‑177 (MQ=255)                                                                                                                                      aGCTGCTGCACGACCGATCGGGCCACTACGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATa                                                                                     <  1:95331/203‑1 (MQ=255)                                                                                                                                         tgctgcACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTct                                                                                                      >  1:85669/1‑182 (MQ=255)                                                                                                                                           ctgcACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTCCTCAGGCt                                                 <  1:504863/234‑1 (MQ=255)                                                                                                                                                    cGATCGGGCCTCTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGt                                       <  1:170140/235‑1 (MQ=255)                                                                                                                                                      aTCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACg                                                                                  >  2:666886/1‑190 (MQ=255)                                                                                                                                                         gggCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATg                                 >  1:200759/1‑236 (MQ=255)                                                                                                                                                             ttgagccgacagataggcctgctggagagcgaactggaaatgcaactgctggcgcgccagcaGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAg                                                    >  1:746945‑M2/63‑213 (MQ=255)                                                                                                                                                             ttgagccgacagataggcctgctggagagcgaactggaaatgcaactgctggcgcgccagcaGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAg                                                    <  2:746944‑M2/151‑1 (MQ=255)                                                                                                                                                                ttCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAAcc                           >  1:535840/1‑235 (MQ=255)                                                                                                                                                                   gTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCg                       >  1:378909/1‑236 (MQ=255)                                                                                                                                                                     aCAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGtt                                                         <  1:562871/200‑1 (MQ=255)                                                                                                                                                                        aCTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCGGTTTCAAAGTCATTGTGGTTCTAAgtc                                                  >  1:188219/1‑202 (MQ=255)                                                                                                                                                                            ccgccCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGc               <  1:323027/235‑1 (MQ=255)                                                                                                                                                                              gccCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTAt            >  1:577298/1‑236 (MQ=255)                                                                                                                                                                               cccGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCtctc                                                                                                                                                                                     <  2:240424/66‑1 (MQ=255)                                                                                                                                                                               cccGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCtctc                                                                                                                                                                                     >  1:240424/1‑66 (MQ=255)                                                                                                                                                                               cccGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCAt                         <  1:645674/222‑1 (MQ=255)                                                                                                                                                                               cccGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCAt                         >  2:645673/1‑222 (MQ=255)                                                                                                                                                                                 cGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTAtt           >  2:502453/1‑234 (MQ=255)                                                                                                                                                                                   tggagagcgaactggaaatgcaactgctggcgcgccagcaGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCAt                                                                <  1:359631‑M2/139‑1 (MQ=255)                                                                                                                                                                                                 gATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATc                                                                                          <  1:671218/139‑1 (MQ=255)                                                                                                                                                                                                 gATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATc                                                                                          >  2:671217/1‑139 (MQ=255)                                                                                                                                                                                                  aTACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATg                                 <  1:196104/195‑1 (MQ=255)                                                                                                                                                                                                    aCCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTATTTGTTCAGcc  <  2:322282/224‑1 (MQ=255)                                                                                                                                                                                                        tCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCTGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTATTTGTTCAg    <  1:417024/218‑1 (MQ=255)                                                                                                                                                                                                         cATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGGCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGga                    <  2:87085/201‑1 (MQ=255)                                                                                                                                                                                                          aTGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAgg                                                                                                                                                                              <  2:14086/46‑1 (MQ=255)                                                                                                                                                                                                                    GCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCAtt                                                               <  2:717139‑M1/147‑1 (MQ=255)                                                                                                                                                                                                                     ccagcaGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGACCGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCACTGTGGTTCTCAGGCt                                                 <  2:302616‑M2/154‑1 (MQ=255)                                                                                                                                                                                                                        gcaGTTGCATTTCCAGTTCGCTCTCCAGCTGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTAt                                               <  2:336880‑M2/156‑1 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                         CCCCGGGAAGCGTGCCTGGGCCTGGGTAATGATGGCCGGCAACAACAGTGCCGAGGCAGTGGCGGGAATCGAGATGGCCACGTGCCCCTTGGGGTTGCCGCGGCTGGATTTCAGCTCGTCTTTCACCGAATCGAGCTGCTGCACGACCGATCGGGCCACTTCGTACAACTGCCGCCCGGCATCGGTCAGTTCGATACCGTCATGCTGGCGCGCCAGCAGTTGCATTTCCAGTTCGCTCTCCAGCAGGCCTATCTGTCGGCTCAAGGCCGGTTGGGCGATGAACGCCTGGCGTGCGGCATTGGAAAAACTGCCGGCTTCGACAATGGCGATCAAATAACGCAGCTGTTTCAAAGTCATTGTGGTTCTCAGGCTATGCCGAAGTGATATGGCAACCATCGGGAGACGCTATTTGTTCAGCC  >  AE015451/2320884‑2321302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.