New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 3296493 = | 36 (0.900) | 4 (0.110) | 3/320 | NT | 11.1% | coding (382/492 nt) | PP_2898 | conserved exported protein of unknown function |
? | AE015451 | 3296511 = | 30 (0.790) | coding (364/492 nt) | PP_2898 | conserved exported protein of unknown function |
CGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCGGCATGGGTGGCCAACTCGC > AE015451/3296285‑3296738 | cGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGAt > 1:393011/1‑236 (MQ=255) tatCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGAt < 2:279651/233‑1 (MQ=255) tGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGTCCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTgg < 2:393010/233‑1 (MQ=255) ggACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGGGgcggcg > 1:96214/1‑232 (MQ=255) cgtacgccaggccggctacctgcagaccgacgccgcaccggtacatttcagcgggcccacagcccgcttgcccgacctggcccgacaaacgctggcgcaggccgaccaggcacagccactgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGt < 1:587103‑M2/41‑1 (MQ=255) cTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTCCAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAg < 1:235341/229‑1 (MQ=255) cGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGGCTGAtt > 1:149419/1‑222 (MQ=255) cgcgATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGgcggcg < 1:167905/192‑1 (MQ=255) cgcgATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGgcggcg > 2:167905/1‑192 (MQ=255) cgATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTgc < 2:29482/236‑1 (MQ=255) tgCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGAGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTg < 1:344350/194‑1 (MQ=255) gCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCCCAGCGCGTGCAACGGCTGGCCGTTGCGCCGGCCGCTGACCCGGTCGGCa > 2:209356/1‑170 (MQ=255) tCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTgg > 1:513031/1‑133 (MQ=255) aaTCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCaa > 1:321877/1‑235 (MQ=255) gTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCtgtgc > 1:434171/1‑235 (MQ=255) aaaCTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAAt > 1:587959/1‑235 (MQ=255) cTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAg < 2:237019/158‑1 (MQ=255) ccAGCTAGGCTTGAGGGGGGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTg < 1:82830/231‑1 (MQ=255) aggcacagccactgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcGCTGGCCGATGCCCTGGTCGGCAAAGTggc < 2:577928‑M2/30‑1 (MQ=255) aggcacagccactgaatcagacccaggtactgtaccgccgccactttgccgaccaggtcatcggccagcgcaacggccagccgttgcGCTGGCCGATGACCTGGTCGGCAAAGTggc > 1:577929‑M2/88‑117 (MQ=255) aTAGGCTTGAGGGGTGGGGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGt < 2:178203/174‑1 (MQ=255) aTAGGCTGGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGc < 2:264302/193‑1 (MQ=255) gAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGt > 2:61434/1‑127 (MQ=255) gAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCg > 2:333046/1‑203 (MQ=255) ggTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCt > 1:24840/1‑201 (MQ=255) gTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTa > 1:42309/1‑233 (MQ=255) cgcATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTg < 1:628174/236‑1 (MQ=255) aTGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGc > 1:388557/1‑235 (MQ=255) gtactgtaccgccgccacttggccaaccaggccatcggccagcgcaacggccagccgttgcGCTGGCCGATGACCTGGTCGGCAAAGTggc < 2:626489‑M2/30‑1 (MQ=255) actgtaccgccgccactttgccgaccaggtcatcggccagcGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTAcg < 1:587103‑M1/194‑1 (MQ=255) cAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGc < 1:693957/175‑1 (MQ=255) gccactttgccgaccaggtcatcggccagcGCAACGGCTGGCCGTTGCGCTGGCCGATGGCCTGGTTGGCCAAGTGGCGGCGGTACAGTAc < 2:626489‑M1/61‑1 (MQ=255) gccactttgccgaccaggtcatcggccagcGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCt > 1:577929‑M1/31‑117 (MQ=255) gccactttgccgaccagggcatcggccagcGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCt < 2:577928‑M1/87‑1 (MQ=255) tCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAg < 2:434170/227‑1 (MQ=255) gACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGc > 2:13406/1‑60 (MQ=255) aGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGc < 2:149419/147‑1 (MQ=255) cgcgTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGc < 2:209778/145‑1 (MQ=255) gTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCGGCAt > 1:577828/1‑233 (MQ=255) GCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCGGCATgg < 2:292387‑M1/233‑1 (MQ=255) AACGGCTGGCCGTTGCGCTGGCCGATGCCCTGGTCGGCAAAGTGgcggcg < 2:234083‑M1/50‑1 (MQ=255) ACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCAt > 2:587102‑M1/1‑212 (MQ=255) CGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCgg > 1:333047‑M1/1‑224 (MQ=255) gttgcGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCGGCATGGGTGGCCAACTcgc > 2:640031‑M2/6‑233 (MQ=255) | CGATATCTGGCGCTGTAGGAAATGGCGTGGACATCTGGCTGCGCCTCCTGGTTTCCTGTCGGGGCGCTCGCGATGATGTGCAGTGGGTACAGCACCCCTCAATCGCACGGGTAGCTGCTCAGCAAACTGGCGCTACCCAGATAGGCTTGAGGGGTGGCGCGCATGCTCGGCGGCAACGTGCGCCAATCGACCAGCAGGCACAGCGCGTGCAACGGCTGGCCGTTGCGCTGGCCGATGACCTGGTCGGCAAAGTGGCGGCGGTACAGTACCTGGGTCTGATTCAGTGGCTGTGCCTGGTCGGCCTGCGCCAGCGTTTGTCGGGCCAGGTCGGGCAAGCGGGCTGTGGGCCCGCTGAAATGTACCGGTGCGGCGTCGGTCTGCAGGTAGCCGGCCTGGCGTACGCGTTGCCACAGTTGTTGCCATTGGCTGGCACCGGCATGGGTGGCCAACTCGC > AE015451/3296285‑3296738 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |