| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4001760 = | 34 (0.850) | 3 (0.080) | 3/300 | NT | 9.6% | intergenic (+77/‑57) | dmoA‑II/allE | dimethyl‑sulfide monooxygenase/putative S‑ureidoglycine aminohydrolase |
| ? | AE015451 | 4001778 = | 26 (0.730) | intergenic (+95/‑39) | dmoA‑II/allE | dimethyl‑sulfide monooxygenase/putative S‑ureidoglycine aminohydrolase | |||||
ACCTGCTGGTGCCCGAGCTGCAACGGCGCGGCCGCTACCCGCTGAGCTACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGCCGTCATCCCCAAAGGCGTGATGCGTGACATCGTCACCAGCCACCTGCCCTTCTGGGACAAGATGCGCATGTGG > AE015451/4001547‑4001981 | aCCTGCTGGTGCCCGAGCTGCAACGGCGCGGCCGCTACCCGCTGAGCTACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGtt > 2:321251/1‑233 (MQ=255) cTGCAACGGCGCGGCCGCTACCCGCTGAGCTACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATgggg < 1:229380/228‑1 (MQ=255) gCTACCCGCTGAGCTACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTc > 1:742031/1‑236 (MQ=255) gCTACCCGCTGAGATACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTc < 1:93169/227‑1 (MQ=255) ccTGCGCCACAAGCTGGTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAacaaca < 1:125875/195‑1 (MQ=255) cTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGtt < 2:63189/171‑1 (MQ=255) cTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGtt > 1:63189/1‑171 (MQ=255) tGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCa > 1:64544/1‑236 (MQ=255) caAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTggg < 1:197093/236‑1 (MQ=255) aaGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTggg < 1:321252/235‑1 (MQ=255) aaGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGGTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGc < 1:429849/236‑1 (MQ=255) ggCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCaa < 2:534762/156‑1 (MQ=255) aCGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACCTTTAATTTGTGGCTGCAACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGga < 2:571230/131‑1 (MQ=255) aggtcagCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGa > 2:497006/1‑233 (MQ=255) tcggttggagccgggtgcccaccgtggggggcgaagtatgaatggttcgacatggacgatctcgacttgttgttctctccccatgccttgaaCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGt > 2:202463‑M1/93‑153 (MQ=255) agCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTc > 2:612504/1‑159 (MQ=255) cATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGcc < 1:182866/236‑1 (MQ=255) cATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGcc < 1:497007/236‑1 (MQ=255) aaTACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGCTCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCAATGTTCACCGAAGCCTATGCCGTCATCCCCa > 1:5913/1‑233 (MQ=255) ggTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGGGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGCTCGTCCATGTCGAACCATTCATACTTCGCCCCCCACgg > 2:539196/1‑155 (MQ=255) tATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCa > 1:267012/1‑150 (MQ=255) tATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCa < 2:267011/150‑1 (MQ=255) tATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACgg < 1:689867/153‑1 (MQ=255) tATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACgg > 2:689866/1‑153 (MQ=255) aTTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGt > 1:606399/1‑124 (MQ=255) aTTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGt < 2:606398/124‑1 (MQ=255) aTTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCAcc > 1:322196/1‑160 (MQ=255) ttAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGCCGTCATcc < 2:742030/210‑1 (MQ=255) gaatggttcgacatggacgttctcgacttgttgttctctccccatgccttgaaCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTc > 2:379410‑M1/54‑115 (MQ=255) gacatggacgatctcgacttgttgttctctccccatgccttgaaccgcaccggccggtgcggTTCAAGGCATGGGGAGAGAACAACAAGTCGAGAACGTCCATGTCGAACCATTc > 2:379410‑M2/63‑115 (MQ=255) acatggacgatctcgacttgttgttctctccccatgccttgaaccgcaccggccggtgcggTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCCAACCGa > 2:202463‑M2/62‑153 (MQ=255) aTGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGCCGTCATCCCCAAAGGCGTGATGCGTGACATCGTCACCAGCCAcc > 1:421014/1‑235 (MQ=255) gcgatctcgacttgttgttctctccccatgccttgaaccgccccggccggtgcggTTCAAGGCATGGGGAGAGAACAACAAGTCg < 1:186707‑M2/30‑1 (MQ=255) cgacttgttgttctctccccatgccttgaaCCGCACCGGCCGGGGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATcgc < 1:186707‑M1/55‑2 (MQ=255) ccACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGCCGTCATCCCCAAAGGCGTGATGCGTGACATCGTCACCAGCCACCTGCCCTTCTGGGACAAGATGCGCATGTgg > 1:671274/1‑236 (MQ=255) acaTCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCCCCGAAGCCTATGCCGTCATCCCCAAAGGCGTGACGCGTGACATCGTCACCAccccc > 2:78506/1‑202 (MQ=255) cgccgcACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTCCTGACTGCCCGTGCCag > 2:107046/1‑132 (MQ=255) ccggccggtgcggTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGt < 1:495428‑M2/108‑1 (MQ=255) CCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGt < 2:495427‑M1/121‑1 (MQ=255) | ACCTGCTGGTGCCCGAGCTGCAACGGCGCGGCCGCTACCCGCTGAGCTACACCGAGGGCCCCCTGCGCCACAAGCTGTTCGGCCGCGGCGGCCAGCTGCCCGAACGGCACGTTGGACGTCAGGTCAGCATTCAGTGATCAAATACCGGGTATTCCAACATTTAATTTGTGGATGCCACGCACTCGACCCTATTCTGTGGCCACATCCCCTGCGCCGCACCGGCCGGTGCGGTTCAAGGCATGGGGAGAGAACAACAAGTCGAGATCGTCCATGTCGAACCATTCATACTTCGCCCCCCACGGTGGGCACCCGGCTCAAACCGAGCTGCTGACTGACCGTGCCATGTTCACCGAAGCCTATGCCGTCATCCCCAAAGGCGTGATGCGTGACATCGTCACCAGCCACCTGCCCTTCTGGGACAAGATGCGCATGTGG > AE015451/4001547‑4001981 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |