| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2927093 = | 49 (0.790) | 7 (0.120) | 5/326 | NT | 13.0% | coding (360/2472 nt) | PP_2565 | putative helicase, UvrD/REP family |
| ? | AE015451 | 2927180 = | 47 (0.800) | coding (447/2472 nt) | PP_2565 | putative helicase, UvrD/REP family | |||||
CTGCCACAGGGCGAACACCTGCAGCAGGCGCTTGATGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2927333‑2927093‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaggcgcCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCTGTGGCAGATCAACCT > AE015451/2927180‑2927341 CTGCCACAGGGCGAACACCTGCAGCAGGCGCTTGATGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCA > 1:1106648/1‑236 AGGGCGAACACCTGCAGCAGGCGCTTGATGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCG < 1:347306/236‑1 CACCTGCAGCAGGCGCTTGATGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGC < 1:72885/232‑1 TGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGG < 1:734428/198‑1 TCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCT < 1:195060/213‑1 TAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAG < 2:885837/146‑1 CAGCAGGATACGAAGACCCAGCGACGTGGGCTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCT < 1:120242/154‑1 AGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAG < 1:543437/125‑1 AGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAG > 2:543436/1‑125 ATACGCATCACCAGCGACGTGGACTTGCCTGCCCCGGCTCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAG < 2:364265/119‑1 CGACGTGGCCTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATT < 1:321387/162‑1 CGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACG < 1:961367/174‑1 TGGACTTGCCTGCCCGGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGCCGGGGC < 2:238242/110‑1 GTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGATTCGGCGGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTG < 2:890899/100‑1 GGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGT < 2:1067348/44‑1 GGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCG < 2:578048/92‑1 AGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCTGTGGCAGATCAACCT < 2:364213/168‑1 CTGCCACAGGGCGAACACCTGCAGCAGGCGCTTGATGAAGTCCTTGCGCGATTCGCGGGTGAAGGTGACCACGGTCATTGCATCCAGCTCGTAACCCAGGTAATGACGCAGCAGCAGGATACGCAGCACCAGCGACGTGGACTTGCCTGCCCCGGCGCCTGCCACCACGCAGGTAGACGGGGTGTCACTGAAGATCAGCTTCCATTGCGCGGCGCTGGGCTGGGCTTCGGCGGGCAGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2927333‑2927093‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaggcgcCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCTGTGGCAGATCAACCT > AE015451/2927180‑2927341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |