New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2927093 =	49 (0.790)	7 (0.120)	5/326	NT	13.0%	coding (360/2472 nt)	PP_2565	putative helicase, UvrD/REP family
	?	AE015451	2927180 =	47 (0.800)					coding (447/2472 nt)	PP_2565	putative helicase, UvrD/REP family

GTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCT  >  AE015451/2926865‑2927326                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          gTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAgcg                                                                                                                                                                                                                                         >  2:1106647/1‑231 (MQ=255)       cGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAg                                                                                                                                                                                                                                           >  2:396538/1‑223 (MQ=255)         gccacgccacAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGaa                                                                                                                                                                                                                            <  1:912555/236‑1 (MQ=255)                             aCTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAgc                                                                                                                                                                                                                                          >  2:428830/1‑202 (MQ=255)                                    aTGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGaa                                                                                                                                                                                                  >  1:831380/1‑235 (MQ=255)                                       ccGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAg                                                                                                                                                                                                 <  2:1044260/233‑1 (MQ=255)                                       ccGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGGTGAAGACGCGCTTCCAGGCCGATGGCGCCCAGCGCCTGCCCGCCGCagcccagc                                                                                                                                                                                                                     >  2:123534/1‑213 (MQ=255)                                              cgtgcgtgAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCa                                                                                                                                                                                       >  1:673488/1‑236 (MQ=255)                                                     gAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGacac                                                                                                                                                                                >  1:341731/1‑236 (MQ=255)                                                                   aggttgatctgccacagggcgaacacctgcagcaggcgcttgatgaagtccttgcgcgattcgcgggtgaaggtgaccacggtcattgcatccagctcgtaacccaggtaatgacgcagcagcaggatacgcagcaccagcgacgtggacttgcctgccccgGCGCCt                                                                                                                                                                                                                                      <  2:364213‑M1/6‑1 (MQ=255)                                                                      tCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGcgcc                                                                                                                                                                                                             >  2:1003985/1‑190 (MQ=255)                                                                        gggTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAagcccagcc                                                                                                                                                                                                                    >  2:485740/1‑181 (MQ=255)                                                                        gggTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCgtggtg                                                                                                                                                             >  1:15955/1‑236 (MQ=255)                                                                        gggTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGCCTACCt                                                                                                                                                                     >  2:1069300/1‑228 (MQ=255)                                                                                   tttGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCgg                                                                                                                                                  >  1:860690/1‑236 (MQ=255)                                                                                       aaGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGCTGTCGCCCAGCGCCTGCccg                                                                                                                                                                                                                                 >  1:253276/1‑153 (MQ=255)                                                                                         tcGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCGGa                                                                                                                                                                                             >  2:529640/2‑187 (MQ=255)                                                                                               cgcCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTc                                                                                                                                      <  1:877072/236‑1 (MQ=255)                                                                                               cgcCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTc                                                                                                                                      >  1:448145/1‑236 (MQ=255)                                                                                                 ccAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCa                                                                                                                                    >  1:755130/1‑236 (MQ=255)                                                                                                      tGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGaa                                                                                                                                                                                                                            <  1:901838/143‑1 (MQ=255)                                                                                                      tGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGaa                                                                                                                                                                                                                            >  2:901837/1‑143 (MQ=255)                                                                                                                       aCGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACACCTTGTTCGCCGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGgcgc                                                                                                                                                     <  1:315798/197‑1 (MQ=255)                                                                                                                        cgcgCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGc                                                                                                                                                                   <  1:963314/182‑1 (MQ=255)                                                                                                                           gcCCCGACAGCGCCGCTGGGCCAGGCCCGGATGACAACTTGTTCGACGACTGGCCCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGaa                                                                                                                                                                                                                            <  1:348581/122‑1 (MQ=255)                                                                                                                             cccGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGaa                                                                                                                                                                                                                            <  2:27142/120‑1 (MQ=255)                                                                                                                             cccGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTg                                                                                                                                                                                    >  1:849102/1‑160 (MQ=255)                                                                                                                                   aGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTc                                                                                                   >  1:764528/1‑235 (MQ=255)                                                                                                                                             tgCCAGGCCAGGATGACAACTTGTCCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACg                                                                                                                                  <  1:315868/194‑1 (MQ=255)                                                                                                                                                caggccaggATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGGCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGCCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTa                                                                                      >  1:638469/1‑235 (MQ=255)                                                                                                                                                caggccaggATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTAc                                                                                     <  1:123534/236‑1 (MQ=255)                                                                                                                                                  cggtcattgcatccagctcgtaacccaggtaatgacgcagcagcaggatacgcagcaccagcgacgtggacttgcctgccccgGCGCCTGcc                                                                                                                                                                                                                                   <  2:578048‑M1/9‑1 (MQ=255)                                                                                                                                                     caggATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGGCCACGTCGCGGGtg                                                                                                                         >  1:260913/1‑195 (MQ=255)                                                                                                                                                          tGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATg                                                                           >  1:1004669/1‑236 (MQ=255)                                                                                                                                                            aCAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGAt                                                                            <  2:764527/233‑1 (MQ=255)                                                                                                                                                                cTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCCGCCCGCCGAAGCACAGCCCAGCGCCGCGCAATgg                                                                                                                                                                                                    >  2:342753/1‑109 (MQ=255)                                                                                                                                                                 ttGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCTCAGCGCCTGCCCGCCGAAGCCCAGCCCAGcgcc                                                                                                                                                                                                             <  1:132689/99‑1 (MQ=255)                                                                                                                                                                 ctGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGAt                                                                                                                                                                                            <  2:235864/115‑1 (MQ=255)                                                                                                                                                                    cgtaacccaggtaatgacgcagcagcaggatacgcagcaccagcgacgtggacttgcctgccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCg                                                                                                                               <  1:961367‑M1/109‑1 (MQ=255)                                                                                                                                                                      cgacgaCTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGt                                                                 <  2:755129/234‑1 (MQ=255)                                                                                                                                                                        acgacTGGCGCATGCCGTTGACGGCCGAGTTGAAGAAGCGCGTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCt                                                                                                                             <  2:634872/172‑1 (MQ=255)                                                                                                                                                                          gacTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGggcaggc                                                                                                                                           <  2:341730/156‑1 (MQ=255)                                                                                                                                                                               gcgcCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCaa                                                                        <  2:881540/218‑1 (MQ=255)                                                                                                                                                                                aatgacgcagcagcaggatacgcagcaccagcgacgtggacttgcctgccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGGCCACGTCg                                                                                                                               <  1:321387‑M1/109‑1 (MQ=255)                                                                                                                                                                                            aCGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATcgcg                                         <  1:396539/236‑1 (MQ=255)                                                                                                                                                                                             caggatacgcagcaccagcgacgtggacttgcctgccccgGCGCCTGCCCGCCGAATCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGacac                                                                                                                                                                                <  2:890899‑M1/60‑1 (MQ=255)                                                                                                                                                                                              ggCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATcgc                                          <  2:1044407/233‑1 (MQ=255)                                                                                                                                                                                                ccGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAg                                     <  1:1069301/236‑1 (MQ=255)                                                                                                                                                                                                   acgcagcaccagcgacgtggacttgcctgccccgGCGCCTGccc                                                                                                                                                                                                                                  <  2:1067348‑M1/10‑1 (MQ=255)                                                                                                                                                                                                   aGTTGAAGAAGCGGTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAgg                                                                                                                                                        <  2:24425/118‑1 (MQ=255)                                                                                                                                                                                                       gaagaaGCGCTTCAAGGCCGATGCAGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTc                                                                                                                                      <  2:310371/132‑1 (MQ=255)                                                                                                                                                                                                        aagaagCGCTTCAAGGCCGATGTCGCCCAGCGCCt                                                                                                                                                                                                                                      <  1:498019/35‑1 (MQ=255)                                                                                                                                                                                                           aagCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCAtt                                                                                                <  2:986864/166‑1 (MQ=255)                                                                                                                                                                                                             agcgacgtggacttgcctgccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGa                                               <  1:195060‑M1/189‑1 (MQ=255)                                                                                                                                                                                                             agcgacgtggacttgcctgccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGCCCACGTCGCTGGGTCTTCGTATCctgctg                                                                                                          <  1:120242‑M1/130‑1 (MQ=255)                                                                                                                                                                                                                     aGGCCGATGTCGCCCAGCGCCTGCCCGCCGAagcc                                                                                                                                                                                                                         >  2:498018/1‑35 (MQ=255)                                                                                                                                                                                                                     aGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCCAGTCCACGTCGCTGGTGCTGCGt                                                                                                                   >  2:145854/1‑137 (MQ=255)                                                                                                                                                                                                                             gTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGgt           <  2:860689/233‑1 (MQ=255)                                                                                                                                                                                                                              tgccccAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTc       >  1:871056/4‑236 (MQ=255)                                                                                                                                                                                                                              tCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCgcgc                                        <  2:849101/203‑1 (MQ=255)                                                                                                                                                                                                                              tCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAgc                        >  1:619173/1‑219 (MQ=255)                                                                                                                                                                                                                               gccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGgtg          <  1:72885‑M1/226‑1 (MQ=255)                                                                                                                                                                                                                               gccccgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCCGGGCAGGCAAGTCCa                                                                                                                                    <  2:238242‑M1/104‑1 (MQ=255)                                                                                                                                                                                                                                   cgGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCt  <  1:347306‑M1/234‑1 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          GTTCCTCGGCCACGCCACAGGCCAGCGCACTGGCCATGCCGATGGCGTGCGTGAAGGGTTCGAGCGTGGTCGGGTGGAGGGCTTTGAAGCGGGGCGCCAGGTGCTGGTGATCCGCGATACGCGCCCCGACAGCGCCGCTGTGCCAGGCCAGGATGACAACTTGTTCGACGACTGGCGCCTGCCGTTGACGGCCGAGTTGAAGAAGCGCTTCAAGGCCGATGTCGCCCAGCGCCTGCCCGCCGAAGCCCAGCCCAGCGCCGCGCAATGGAAGCTGATCTTCAGTGACACCCCGTCTACCTGCGTGGTGGCAGGCGCCGGGGCAGGCAAGTCCACGTCGCTGGTGCTGCGTATCCTGCTGCTGCGTCATTACCTGGGTTACGAGCTGGATGCAATGACCGTGGTCACCTTCACCCGCGAATCGCGCAAGGACTTCATCAAGCGCCTGCTGCAGGTGTTCGCCCT  >  AE015451/2926865‑2927326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.