New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 3248931 = | 48 (0.780) | 4 (0.070) | 4/328 | NT | 8.4% | coding (551/1704 nt) | ureC | urease subunit alpha |
? | AE015451 | 3249025 = | 41 (0.700) | coding (645/1704 nt) | ureC | urease subunit alpha |
CAGTCTTCATGCAGCTTGAGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3249045‑3248931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTG > AE015451/3249025‑3249239 CAGTCTCCATGCAGCTTGAGCCCGACGGTGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCG < 2:822794/114‑1 GTCTTCATGCAGCTTGAGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGC > 1:67841/1‑231 CGCCTGCGGCAAACTGCTAGGGGACCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGT < 2:667541/84‑1 GCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAG > 2:893613/1‑230 CCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGT < 1:982333/94‑1 CCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGT > 2:982332/1‑94 CTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTt > 2:600755/1‑221 CTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACC < 2:715193/182‑1 GGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCTTCGACTGTTGCCTGGGCGTGGCCGAGGAATTGGTTTTTCAGGTGGCGATTCACACCGACACCCTCAACGAGTC < 2:1107585/115‑1 GGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATC < 2:822385/161‑1 CAGTCTTCATGCAGCTTGAGCCCGACAGCGCCTGCGGCAATCTGCTCGCGCAGCGCGTCTGGCCGCGAGGCATTGCCCTTGCCCAGCAGCCCGATGTTGATCGGCAAGCTGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3249045‑3248931 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTG > AE015451/3249025‑3249239 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |