New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3248931 =	48 (0.780)	4 (0.070)	4/328	NT	8.4%	coding (551/1704 nt)	ureC	urease subunit alpha
	?	AE015451	3249025 =	41 (0.700)					coding (645/1704 nt)	ureC	urease subunit alpha

TTTGCCCACAGCAGGTGGACGAGGCATTGAACAGCGGTGTCACCACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTGCGGC  >  AE015451/3248793‑3249243                                                                                                                                                                                                                                         |                                                                                                                                                                                                                           tttGCCCACAGCAGGTGGCCGAGGCATTGAACAGCGGTGTCACCACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTc                                                                                                                                                                                                                         <  1:312846/236‑1 (MQ=255)                tGGACGAGGCATTGAACAGCGGTGTCACCACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGCCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGAc                                                                                                                                                                                                          <  1:516566/236‑1 (MQ=255)                     gcccgactcgttgagggtgtcggtgtgaatcgccacctggatatccatttcctcggccacgcccaggcaacagtcgatggctgctggcgtagagccccagtcttcatgcagcttgagcCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGAc                                                                                                                                                                                                          >  1:67841‑M1/119‑231 (MQ=255)                                        tCACCACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCcagca                                                                                                                                                                                        <  2:899109/230‑1 (MQ=255)                                           ccacGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCa                                                                                                                                                                                                                        <  1:637913/195‑1 (MQ=255)                                            cacGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTgg                                                                                                                                                                                                       <  2:581214/211‑1 (MQ=255)                                                   aTCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTg                                                                                                                                                                          >  2:959772/1‑233 (MQ=255)                                                      ggcggTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGAc                                                                                                                                                                                                          <  1:170931/198‑1 (MQ=255)                                                       gcggTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCcag                                                                                                                                                                                          <  1:425709/213‑1 (MQ=255)                                                             gAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGcc                                                                                                                                                             <  1:708022/236‑1 (MQ=255)                                                                ccGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGa                                                                                                                                                           <  1:959773/235‑1 (MQ=255)                                                                     ccggccACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGaa                                                                                                                                                       >  2:403471/1‑234 (MQ=255)                                                                                     aTGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCg                                                                                                                                     <  1:583716/236‑1 (MQ=255)                                                                                                tGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCCATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCACGCTGCATGAAGACTGGGGCTCTACGCCAGCCGCCATCGACTGTTGCCTgcg                                                                                                                                                                    >  2:95061/1‑192 (MQ=255)                                                                                                            cccTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGatat                                                                                                                                               >  2:504526/1‑203 (MQ=255)                                                                                                                    ccTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCt                                                                                                      <  1:249648/236‑1 (MQ=255)                                                                                                                    ccTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCCACGCCAGCAGCCATCGACt                                                                                                                                                                              >  2:319281/1‑164 (MQ=255)                                                                                                                        gtcttcatgcagcttgagcccgacagcgcctgcggcaatctgctcgcgcagcgcgtctggccgcgaggcattgcccttgcccagcagcccgatgttgatcggcaagctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGc                                                                                                       >  1:67841‑M2/114‑231 (MQ=255)                                                                                                                          gcgcATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTgggg                                                                                                                                                                                                     >  2:253961/1‑135 (MQ=255)                                                                                                                          gcgcATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTgggg                                                                                                                                                                                                     >  2:1102658/1‑135 (MQ=255)                                                                                                                          gcgcATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTgg                                                                                                                                                                     >  2:474932/1‑167 (MQ=255)                                                                                                                            gcATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGGAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGcc                                                                                                                                                                                            >  2:774677/1‑142 (MQ=255)                                                                                                                                 ttGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGa                                                                                                                          <  1:647616/203‑1 (MQ=255)                                                                                                                                            CGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCACCGTCGGGCTCAAGCTGCATGGAGACTg                                                                                                                                                                                                        <  2:822794‑M1/114‑1 (MQ=255)                                                                                                                                                    tGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGAc                                                                      <  1:580368/236‑1 (MQ=255)                                                                                                                                                        gATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTg                                                                                                                                                                             >  2:47695/1‑129 (MQ=255)                                                                                                                                                        gATCAACATCGGGCTGCTGGGCAAGCGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCCGGCGCTGTCGGGCTCAAGCTGCATGACGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCCGGGCg                                                                                                                                                                  >  2:139814/1‑140 (MQ=255)                                                                                                                                                          tCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTg                                                                                                                                                                      <  2:939410/134‑1 (MQ=255)                                                                                                                                                                 cGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTc                                                                                                           <  2:848989/186‑1 (MQ=255)                                                                                                                                                                   ggCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACAcc                                                       <  1:88227/236‑1 (MQ=255)                                                                                                                                                                           ggcaagggcaaTGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACg                                                                                                               >  2:852707/1‑172 (MQ=255)                                                                                                                                                                           ggcaagggcaaTGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGaa                                                                                              >  1:298700/1‑189 (MQ=255)                                                                                                                                                                           ggcaagggcaaTGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCTGCCATCGGCGACCGCACCATCCACACCTTCCATAc                                               >  1:822386/1‑236 (MQ=255)                                                                                                                                                                             caagggcaaTGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCCGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCg                                             <  1:332648/236‑1 (MQ=255)                                                                                                                                                                                      gcgaggcattgcccttgcccagcagcccgatgttgatcggcaagctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAg                                          >  2:893613‑M2/52‑230 (MQ=255)                                                                                                                                                                                        ccTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACg                                                                                                               >  1:57859/1‑159 (MQ=255)                                                                                                                                                                                        ccTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCACTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACAACCTCaa                                                                                                                 >  2:1033444/1‑157 (MQ=255)                                                                                                                                                                                          tCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGa                                                                                                              >  2:260772/1‑158 (MQ=255)                                                                                                                                                                                                  aGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATg                        <  1:314091/236‑1 (MQ=255)                                                                                                                                                                                                    aCGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATg                        <  1:661307/234‑1 (MQ=255)                                                                                                                                                                                                    aCGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGcc                      <  1:729863/236‑1 (MQ=255)                                                                                                                                                                                                     cgcgCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGc                                                                                                                                                                                             <  2:723167/68‑1 (MQ=255)                                                                                                                                                                                                     cgcgCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGc                                                                                                                                                                                             >  1:723168/1‑68 (MQ=255)                                                                                                                                                                                                      gcgcTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCCGCCaacgtgt                    <  1:421247/236‑7 (MQ=255)                                                                                                                                                                                                      ccgcTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCCGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCacac                                                                                                                             <  2:422500/130‑1 (MQ=255)                                                                                                                                                                                                       cccagcagcccgatgttgatcggcaagctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGt                                                                                                                                                                 <  1:982333‑M2/60‑1 (MQ=255)                                                                                                                                                                                                       cccagcagcccgatgttgatcggcaagctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGt                                                                                                                                                                 >  2:982332‑M2/35‑94 (MQ=255)                                                                                                                                                                                                             gcgAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGAcat              >  1:1114125/1‑235 (MQ=255)                                                                                                                                                                                                                         ccGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTgcggc  <  1:474933/235‑1 (MQ=255)                                                                                                                                                                                                                                  ctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATAcc                                              <  2:715193‑M2/175‑1 (MQ=255)                                                                                                                                                                                                                                  ctgtcggGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCgtt      >  2:600755‑M2/8‑221 (MQ=255)                                                                                                                                                                                                                                        gGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCTTCGACTGTTGCCTGGGCGTGGCCGAGGAATTGGTTTTTCAGGTGGCGATTCACACCGACACCCTCAACGAGTc                                                                                                           <  2:1107585‑M2/114‑1 (MQ=255)                                                                                                                                                                                                                                        gGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATc                                                             <  2:822385‑M2/160‑1 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                           TTTGCCCACAGCAGGTGGACGAGGCATTGAACAGCGGTGTCACCACGTTCATCGGCGGTGGAACCGGGCCGGCCACTGGCACCAATGCCACCACCTGCACGCCCGGCCCCTGGTACCTTGCGCGCATGTTGCAGGCTGCCGACAGCTTGCCGATCAACATCGGGCTGCTGGGCAAGGGCAATGCCTCGCGGCCAGACGCGCTGCGCGAGCAGATTGCCGCAGGCGCTGTCGGGCTCAAGCTGCATGAAGACTGGGGCTCTACGCCAGCAGCCATCGACTGTTGCCTGGGCGTGGCCGAGGAAATGGATATCCAGGTGGCGATTCACACCGACACCCTCAACGAGTCGGGCTGTATCGAAGACACGTTGGCGGCCATCGGCGACCGCACCATCCACACCTTCCATACCGAAGGTGCCGGTGGCGGCCATGCCCCGGACATCATCCGTGCGGC  >  AE015451/3248793‑3249243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.