New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4792835 | 67 (1.080) | 4 (0.070) | 4/330 | NT | 5.9% | coding (1005/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
? | AE015451 | = 4792856 | 63 (1.060) | coding (984/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
TGCGCACAGTGGCGACGTCGGTGACCATCGACTGATGGTTGAAAAGCACCTGGAACAGCGGGCTCACGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4792603‑4792835 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaccgCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATACCCAGGTGCTGCAGACCGACATCGATCCGACTCAGGGTGGTGCGCACCTGCTGAGCCAGGTCAAAGCCTGTGCGGCGCAGGCGCAATCGCACCAGGACGTGCCGTTCGACCAGCTGGTGGAAGCGCTGGGCCTGGAGCGCACCGGGGGCGTGAGCCCGCTGTTCCAGGTGCTTTTCAACCATCAGTCGATGGTCACC < AE015451/4792856‑4792622 TGCGCACAGTGGCGACGTCGGTGACCATCGACTGATGGTTGAAAAGCACCTGGAACAGCGGGCTCACGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCGCAG < 1:970550/236‑1 TCGGTGACCATCGACTGAGGGTTGAAAAGCCCCTGGAACAGCGGGCTCCCGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG < 1:143786/216‑1 AAAAGCACCTGGAACAGCGGGCTCACGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG < 2:662342/192‑1 gCACGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGC < 2:918360/164‑1 CCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG < 1:783528/162‑1 CCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG > 2:783527/1‑162 GCCGGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCGCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATACC < 1:73738/139‑1 ACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCGCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATA < 1:1117931/96‑1 ACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCGCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATA > 2:1117930/1‑96 CACCTGGGTATTGATGAAGCAACCGCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATACCCAGGTGCTGCAGACCGACATCGATCCGACTCAGGGTGGTGCGCACCTGCTGAGCCAGGTCAAAGCCTGTGCGGCGCAGGCGCAATCGCACCAGGACGTGCCGTTCGACCAGCTGGTGGAAGCGCTGGGC > 2:173765/1‑194 GCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATACCCAGGTGCTGCAGACCGACATCGATCCGACTCAGGGTGGTGCGCACCTGCTGAGCCAGGTCAAAGCCTGTGCGGCGCAGGCGCAATCGCACCAGGACGTGCCGTTCGACCAGCTGGTGGAAGCGCTGGGCCTGGAGCGCACCGGGGGCGTGAGCCCGCTGTTCCAGGTGCTTTTCAACCATCAGTCGATGGTCACC > 1:103639/1‑236 TGCGCACAGTGGCGACGTCGGTGACCATCGACTGATGGTTGAAAAGCACCTGGAACAGCGGGCTCACGCCCCCGGTGCGCTCCAGGCCCAGCGCTTCCACCAGCTGGTCGAACGGCACGTCCTGGTGCGATTGCGCCTGCGCCGCACAGGCTTTGACCTGGCTCAGCAGGTGCGCACCACCCTGAGTCGGATCGATGTCGGTCTGCAGCACCTGGGTATTGATGAAGCAACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4792603‑4792835 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaaccgCAGTGAAGTGGAGGGGCTGATCGGTTGCTTCATCAATACCCAGGTGCTGCAGACCGACATCGATCCGACTCAGGGTGGTGCGCACCTGCTGAGCCAGGTCAAAGCCTGTGCGGCGCAGGCGCAATCGCACCAGGACGTGCCGTTCGACCAGCTGGTGGAAGCGCTGGGCCTGGAGCGCACCGGGGGCGTGAGCCCGCTGTTCCAGGTGCTTTTCAACCATCAGTCGATGGTCACC < AE015451/4792856‑4792622 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |