| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5036742 = | NA (NA) | 3 (0.050) | 3/326 | NT | NA | coding (233/336 nt) | PP_4442 | transposase |
| ? | AE015451 | 5036808 = | NA (NA) | coding (299/336 nt) | PP_4442 | transposase | |||||
CTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5036980‑5036742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccatggcTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTC > AE015451/5036808‑5037034 CTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCAT > 1:176951/1‑236CTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCAT > 1:187105/1‑236 TGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATG < 1:714672/236‑1 GAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACAGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCCAAGCCTGGAGTTGGTCGCTGTCGAGTTCGACCTCGCTGACATGGgg > 1:79724/1‑177 AGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGG > 1:523327/1‑172 gCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCT < 2:767793/162‑1 agCGACGACAACCAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCACCGCGCAGCCATGGCAAACCCAGTGCCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATG < 2:780884/135‑1 GCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGG > 2:69299/1‑82 CATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGACCA > 2:923560/1‑112 CAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTGGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTC > 2:18259/1‑169 TGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCG < 2:894294/116‑1 GCCATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTC > 1:632302/1‑235 GCCATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTC > 1:484525/1‑235 CATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTTACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGGTTCGTGCCT > 1:210308/1‑159 ATGGCTGGGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCC > 2:393815/1‑48 ATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCCGGAAGATCCAG > 2:702911/1‑217 ATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACA > 1:106654/1‑168 ATGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCA > 2:935998/1‑166 TGGCTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCC < 2:1060824/205‑1 TGGATGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCG < 2:1107360/162‑1 CTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGATTGGGCGAGAAAGTCATGCCGCCGATTGTGCCAGAGCAGGCCCGAAACGACGACAAACAGACCGGTCAAATGGCCGGCGATTACAGCATGCTGATCACACCGCCTGCACCAACGCGCAGCCATGGCAAACCCAGTACCAACGCCTGGAGTTGTTCGCTGTCGAGTTCGACCTCGCTGCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5036980‑5036742‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccatggcTGCGCGTTGGTGCAGGCGGTGTGATCAGCATGCTGTAATCGCCGGCCATTTGACCGGTCTGTTTGTCGTCGTTTCGGGCCTGCTCTGGCACAATCGGCGGCATGACTTTCTCGCCCAATCTCGACCAGATGACTCCGGAACAGCTTCGTGCCTTGGCGGCACAGGCGTTGCAGTTGCAGTCCCAGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTC > AE015451/5036808‑5037034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |