New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1196535 =	44 (0.710)	4 (0.070)	4/328	NT	8.1%	coding (596/1755 nt)	xcpQ	Type II secretion pathway protein XcpQ
	?	AE015451	1196595 =	49 (0.830)					coding (656/1755 nt)	xcpQ	Type II secretion pathway protein XcpQ

CCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCCGACAGCGAGCTGGCGGCGTACCGGG  >  AE015451/1196334‑1196765                                                                                                                                                                                                          |                                                                                                                                                                                                                                       ccACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCa                                                                                                                                                                                                             >  2:870975/1‑229 (MQ=255)        cgTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTgcgc                                                                                                                                                                                                               >  2:518886/1‑220 (MQ=255)                    gcgcAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAg                                                                                                                                                                                    >  1:1082971/1‑235 (MQ=255)                    gcgcAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGGGGTCAAg                                                                                                                                                                                    >  1:908753/1‑235 (MQ=255)                     cgcAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGt                                                                                                                                                                                  >  1:424760/1‑236 (MQ=255)                                          gTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGc                                                                                                                                                                                                          <  2:418758/191‑1 (MQ=255)                                                       tCAAACCGCTGATCGACGCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTgg                                                                                                                                                                                         <  1:994501/195‑1 (MQ=255)                                                        cAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGt                                                                                                                                                                                                                            <  2:552927/159‑1 (MQ=255)                                                        cAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTTCGCCATGCCAAt                                                                                                                                                                                                      >  1:541319/1‑181 (MQ=255)                                                        cAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCg                                                                                                                                                >  1:642260/1‑235 (MQ=255)                                                               accatgaccacggcattggtcccttcttcgtattccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcccccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTgg                                                                                                                                                                                         >  1:335261‑M1/140‑187 (MQ=255)                                                                 gATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAgg                                                                                                                                        <  2:1082970/234‑1 (MQ=255)                                                                          gcgAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTAc                                                                                                                                                                                                                     >  2:784508/1‑148 (MQ=255)                                                                            gAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCa                                                                                                                                                                    >  1:1058507/1‑195 (MQ=255)                                                                            cattggtaccttcttcgtattccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttccaccggcaccgccccttcctggctgagccctcGCAGCACCCCGGTGAGCTACTTGCGCCATGCCCATGCCGGCg                                                                                                                                                                                               <  2:335260‑M1/42‑1 (MQ=255)                                                                                tGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGaa                                                                                                                                          <  2:463755/217‑1 (MQ=255)                                                                                     ttattaCACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTa                                                                                                                                                                                                                      >  2:313142/1‑136 (MQ=255)                                                                                     ttattaCACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGa                                                                                                                               <  2:692740/223‑1 (MQ=255)                                                                                        cttcgtattccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAgg                                                                                                                                                                         >  1:22055‑M1/115‑178 (MQ=255)                                                                                            gtagtccaggcggatgcccgagccaccggcggctggcaccaccggccggtccttgccctctgccgcacccgcgccgtcaaccggcaccgccccttcctggctgagccctcGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAg                                                                                                                                                                          >  2:91012‑M1/111‑173 (MQ=255)                                                                                                  cccGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAggg                                                                                                                                                                        >  1:552108/1‑169 (MQ=255)                                                                                                  cccGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACCTGCGCCATGCCACTGCCGGCGGAGTGGTCac                                                                                                                                                                                     >  2:302523/1‑155 (MQ=255)                                                                                                   ccGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCggt                                                                                                       >  2:1023495/1‑233 (MQ=255)                                                                                                    cggcggCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGGGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGCGCCg                                                                                                                                                >  1:174171/1‑191 (MQ=255)                                                                                                     ggcggcGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCATCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAg                                                                                                                                                               >  1:687004/1‑175 (MQ=255)                                                                                                             aCCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCt                                                                                                                                                                      >  2:730187/1‑160 (MQ=255)                                                                                                             aCCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGc                                                                                                                                                       >  2:973100/1‑175 (MQ=255)                                                                                                             aCCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGc                                                                                                                                                       <  1:973101/175‑1 (MQ=255)                                                                                                             aCCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAgccgcc                                                                                          >  1:909295/1‑236 (MQ=255)                                                                                                             aCCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGGGAGGCCGAGGGCAAGGACCGGCCGGTGGTGGCAgccgcc                                                                                          >  1:280320/1‑236 (MQ=255)                                                                                                                      cggcggctggcaccaccggccggtccttgccctctgcctcacccgcgccttcaaccggcaccgccccttcctggctgagccctcGCAGCAcc                                                                                                                                                                                                                                 <  2:145645‑M1/8‑1 (MQ=255)                                                                                                                                       agcaACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAAt                                                                 <  1:870976/235‑1 (MQ=255)                                                                                                                                       agcaACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAACGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGCTGcc                                                                                                 >  2:1082340/1‑203 (MQ=255)                                                                                                                                            ccTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACgaa                                                            >  1:639435/1‑235 (MQ=255)                                                                                                                                             cTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGCCCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGAGCTACTTg                                                                                                                                                                                                                  <  2:237500/84‑1 (MQ=255)                                                                                                                                                        cGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCGCCCAGGTGATCTACGTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAgg                                                                                                                             <  2:249808/158‑1 (MQ=255)                                                                                                                                                         gCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATcc                                                                          >  2:672725/1‑208 (MQ=255)                                                                                                                                                           cAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATg                                               <  2:888165/233‑1 (MQ=255)                                                                                                                                                           cAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGCGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGaa                                                                  >  1:865290/1‑214 (MQ=255)                                                                                                                                                           cAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGGTGAAGGCGCGGGGGAGGCCGAGGGCAAGGACCGGCCGGTGGTGCCa                                                                                                >  1:197243/1‑184 (MQ=255)                                                                                                                                                                 gctgcGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTgg                                         >  2:717591/1‑233 (MQ=255)                                                                                                                                                                  ctgcGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCAt                                     <  1:520261/236‑1 (MQ=255)                                                                                                                                                                  cgccgcCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCgggg                                                                              >  1:800514/4‑194 (MQ=255)                                                                                                                                                                     cgcCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCa                                      <  2:639434/232‑1 (MQ=255)                                                                                                                                                                     cgcCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATg                                    >  2:777608/1‑234 (MQ=255)                                                                                                                                                                             cGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGT‑GTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCggtggt                                                                                                    >  2:758501/1‑161 (MQ=255)                                                                                                                                                                                     cTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCCGACAGCGAg                  <  1:518887/236‑1 (MQ=255)                                                                                                                                                                                          tcctggctgtgccctcgcagc                                                                                                                                                                                                                                    >  2:342400‑M1/17‑21 (MQ=255)                                                                                                                                                                                                 cGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCg                                                                         >  2:1087060/1‑169 (MQ=255)                                                                                                                                                                                                 cGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTg                                          >  2:1010112/1‑200 (MQ=255)                                                                                                                                                                                                     cagcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAgg                                                                                                                                        <  2:345779/102‑1 (MQ=255)                                                                                                                                                                                                     cagcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAgg                                                                                                                                        >  1:345780/1‑102 (MQ=255)                                                                                                                                                                                                     cagcggcagcACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAAGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACAGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCCGACAGCGAGCTGGCGGCGTACCggg  >  1:640831/1‑236 (MQ=255)                                                                                                                                                                                                     cagcggcagcACCCAGGCCATCTACTTGCGCCATGCCAATGCCGGCg                                                                                                                                                                                               >  2:125792/1‑47 (MQ=255)                                                                                                                                                                                                          |                                                                                                                                                                                                                                       CCACCCGCGTATTCAGCGTGCGCAACGCCGCCAGCGAACAGGTACTGGGCATCCTCAAACCGCTGATCGACCCGCGAGTTGGGGTTATTACACCGTACCCGGCGGCGCACCAGTTGGTGGTGACTGACTGGCGCAGCAACCTCGAACGCATCGCCAGCCTGCTGCGCCAGCTCGACCGCCCTCAAGAGGTACCGGGCAGCGGCAGCACCCAGGTGATCTACTTGCGCCATGCCAATGCCGGCGAAGTGGTCAAGGTGCTGCGAGGGCTCAGCCAGGAAGGGGCGGTGCCGGTTGAAGGCGCGGGTGAGGCAGAGGGCAAGGACCGGCCGGTGGTGCCAGCCGCCGGTGGCTCGGGCATCCGCCTGGAATACGAAGAAGGTACCAATGCCGTGGTCATGGTCGGCCCCGACAGCGAGCTGGCGGCGTACCGGG  >  AE015451/1196334‑1196765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.