New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1464187 =	51 (0.820)	4 (0.070)	4/326	NT	8.4%	coding (1431/1440 nt)	algX	Alginate biosynthesis protein AlgX
	?	AE015451	1464210 =	39 (0.670)					coding (1408/1440 nt)	algX	Alginate biosynthesis protein AlgX

CTTGTCCGAGCCTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCC  >  AE015451/1463960‑1464415                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                     cTTGTCCGAGCCTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcgc                                                                                                                                                                                                                              <  1:72652/236‑1 (MQ=255)      ccGAGCCTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt                                                                                                                                                                                                                         <  1:396470/236‑1 (MQ=255)       cGAGCCTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt                                                                                                                                                                                                                         <  1:94816/235‑1 (MQ=255)            cTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGCTCCCCTGGTAGTAGCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt                                                                                                                                                                                                                         >  2:600975/1‑230 (MQ=255)                   cTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTgcg                                                                                                                                                                                                                               <  1:26137/217‑1 (MQ=255)                                      gggCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCag                                                                                                                                                                                         <  1:463179/236‑1 (MQ=255)                                          cGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCt                                                                                                                                                                                     >  1:823704/1‑236 (MQ=255)                                           cggccgccacgaggacatcaagctggaaaaaccggaaacctccgacaccgacggccgcttcgtcttccagatgcgcgaagacgaggactgggccagccagcgcctgctcgcgttcgaggtacaggggccggaaagcggcacccagaaggtcgaagccaagctctgcaaacgcaacaacttcgccgTGCCTg                                                                                                                                                                                                                                 <  1:1126294‑M1/6‑1 (MQ=255)                                           cggccgccacaaggacatcaagctggaaaaaccggaaacctccgacaccgacggccgcttcgtcttccagatgcgcgaagacgaggactgggccagccagcgcctgctcgcgttcgaggtacaggggccggaaagcggcacccagaaggtcgaagccaagctctgcaaacgcaacaacttcgccgGGCCt                                                                                                                                                                                                                                  <  2:202816‑M1/5‑1 (MQ=255)                                                       gggCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCt                                                                                                                                                                         <  1:504739/235‑1 (MQ=255)                                                          cgccgcTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGgcctg                                                                                                                                                                                                                                     >  2:392833/1‑172 (MQ=255)                                                          cgccgcTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCtt                                                                                                                                                                        >  2:705631/1‑233 (MQ=255)                                                                ttCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGcc                                                                                                                                                               >  1:25176/1‑236 (MQ=255)                                                                    cAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGc                                                                                                                                                             <  2:692620/234‑1 (MQ=255)                                                                                      ccGGTCTTGAGCTTTTCGGTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGGAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg                                                                                                                                                                                                              <  1:906803/167‑1 (MQ=255)                                                                                       cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt                                                                                                                                                           <  1:501369/217‑1 (MQ=255)                                                                                       cGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCg                                                                                                                                         >  1:876735/1‑235 (MQ=255)                                                                                             tGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCaggcc                                                                                                                                                                                                            >  2:864731/1‑158 (MQ=255)                                                                                              gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc                                                                                                                                    <  2:876734/233‑1 (MQ=255)                                                                                              cggccgcttcgtcttccagatgcgcgaagacgaggactgggccagccagcgcctgctcgcgttcgaggtacaggggccggaaagcggcacccagaaggtcgaagccaagctctgcaaacgcaacaacttcgccgTGCATgcgc                                                                                                                                                                                                                              >  1:307189‑M1/135‑143 (MQ=255)                                                                                                 cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAg                                                                                                                              <  1:1029859/236‑1 (MQ=255)                                                                                                       gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg                                                                                                                                                                                                              >  2:895618/1‑150 (MQ=255)                                                                                                       gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAg                                                                                                                              >  1:56041/1‑230 (MQ=255)                                                                                                       gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctg                                                                                                                        >  1:695376/1‑236 (MQ=255)                                                                                                             cTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTg                                                                                                                                                                                   <  1:40418/171‑1 (MQ=255)                                                                                                                             ggcggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg                                                                                                                                                                                                                   >  2:659878/1‑123 (MQ=255)                                                                                                                             ggcggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCt                                                                                                          >  2:969142/1‑228 (MQ=255)                                                                                                                              gcggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcg                                                                                                  <  1:705632/235‑1 (MQ=255)                                                                                                                               cggTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGCTGTTGCGTTTGc                                                                                                                                                                                           >  1:48919/1‑145 (MQ=255)                                                                                                                                           ggcgTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc                                                                                                                                                                                                                       >  2:211635/1‑105 (MQ=255)                                                                                                                                                  ctgctcgcgttcgaggtacaggggccggaaagcggcacccagaaggtcgaagccaagctctgcaaacgcaacaacttcgccgTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTcc                                                                                                           <  1:674102‑M1/124‑1 (MQ=255)                                                                                                                                                    ggCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc                                                                                                   >  1:709938/1‑212 (MQ=255)                                                                                                                                                       accaccAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGcc                                                                           <  2:887385/233‑1 (MQ=255)                                                                                                                                                        ccaccaAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgct                                                                                                                         <  2:1070337/186‑1 (MQ=255)                                                                                                                                                            caAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCTGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAATACGAAGCGGCCGTCGgttt                                                                   <  1:600976/236‑3 (MQ=255)                                                                                                                                                             aaaCAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTc                                                                  <  2:782256/236‑1 (MQ=255)                                                                                                                                                                   ggCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGcctgcctg                                                                                                                                                                                                                                 >  1:540840/1‑71 (MQ=255)                                                                                                                                                                   ggCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGcctgcctg                                                                                                                                                                                                                                 <  2:540839/71‑1 (MQ=255)                                                                                                                                                                   ggCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCag                                                                                                                                                                                         <  2:1099173/111‑1 (MQ=255)                                                                                                                                                                   ggCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGt                                                            >  1:973751/1‑236 (MQ=255)                                                                                                                                                                      cAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGGTGTTGCGGTTGCAGAGCTTGGCTTCGACCTTCTTGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctgg                                                                                                                       >  1:306746/1‑174 (MQ=255)                                                                                                                                                                       aaCGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAGGCGGCCGTCGGTGTCGGAgg                                                             >  1:18500/1‑231 (MQ=255)                                                                                                                                                                            ggaaagcggcacccagaaggtcgaagccaagctctgcaaacgcaacaacttcgccgTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAg                                                              <  1:1130117‑M1/169‑1 (MQ=255)                                                                                                                                                                            gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCtggctggc                                                                                                                  >  1:83852/1‑173 (MQ=255)                                                                                                                                                                            gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGtt                                                    <  1:390722/235‑1 (MQ=255)                                                                                                                                                                            gAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGGTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTc                                                                                                            >  1:281498/1‑179 (MQ=255)                                                                                                                                                                               cAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAg                                                                                                              <  2:1038897/174‑1 (MQ=255)                                                                                                                                                                               cAGGGCGGGGCTGGAAATGCGTGTGAAAAGGGTCATGGGTCGCCGCACTGGCCTGCCTGCGCGGTCGGCGCGGGCACGGCGAAGTTGTTGCGTGTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGa                                                                                                                                        <  2:57199/148‑1 (MQ=255)                                                                                                                                                                                     ggggCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgtg                                                                    >  2:1018447/1‑210 (MQ=255)                                                                                                                                                                                             aggtcgaagccaagctctgcaaacgcaacaacttcgccgTGCCTGCGCGGTCTGCGCAGGCACGGCGACGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGGCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAgg                                                                                                                             <  1:759945‑M1/106‑1 (MQ=255)                                                                                                                                                                                               aTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGgcctgccc                                                                                                                                                                                                                                  >  2:107980/1‑41 (MQ=255)                                                                                                                                                                                               aTTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGa                                        >  1:668658/1‑228 (MQ=255)                                                                                                                                                                                               aTTCGTTTGAAAAGGGTCATGGGGTGCCTCACTGGCCTGGCTGCGCGGt                                                                                                                                                                                                                           >  2:308678/1‑49 (MQ=255)                                                                                                                                                                                                      ccaagctctgcaaacgcaacaacttcgccgTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGAAGAAGCGGcc                                                                           <  1:43560‑M1/156‑1 (MQ=255)                                                                                                                                                                                                        aaaaGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCg                       <  1:1120407/236‑1 (MQ=255)                                                                                                                                                                                                         aaaGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCGTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCg                       <  1:816907/235‑1 (MQ=255)                                                                                                                                                                                                                    ggTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGt                <  2:643667/231‑1 (MQ=255)                                                                                                                                                                                                                     gTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGCGGTTTCCg                                                       >  2:837907/1‑191 (MQ=255)                                                                                                                                                                                                                     gTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGGCGGAGGTTTCCGGTTTTTc                                                >  2:507940/1‑198 (MQ=255)                                                                                                                                                                                                                             aCTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGcc  <  1:859877/236‑1 (MQ=255)                                                                                                                                                                                                                               gggCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGt      <  2:911042/229‑1 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                     CTTGTCCGAGCCTTCGTACTTGCTGCGAAACTGCAGCGGGCCGGTGTATGGCTGGGGCGCCGCTTCGCAGCGGAAATTACCATCACCGGTCTTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAACGCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTGTCGGAGGTTTCCGGTTTTTCCAGCTTGATGTCCTCGTGGCGGCCGTTGAGGTACCAGAGGGTGGCC  >  AE015451/1463960‑1464415

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.