New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3662077 =	56 (0.910)	3 (0.050)	3/324	NT	5.1%	coding (757/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein
	?	AE015451	3662181 =	58 (1.000)					coding (653/1143 nt)	PP_3226	Acyl‑CoA dehydrogenase‑related protein

CCAGTTCCACGGCCTGGATGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCGTGTCGCAGTGCACAAGGAAGCCGCCGAC  >  AE015451/3661843‑3662305                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                     ccAGTTCCACGGCCTGGATGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  1:691141/236‑1 (MQ=255) ccAGTTCCACGGCCTGGATGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  1:489364/236‑1 (MQ=255)  cgcacggccgaaggctggcgcttgagcgggcgaaagatctactccaccggcagccacggcctgacctggtacctggtgtggggccgcagcgacgacaacgacccgttggtcggcggcttccttgtgcactgcgacacgcctggcatcacgatcatcgatgactgggaccacttgggcatgcgcgccacttgcagccacgaagtgcgcttcgacgatgtgctgattcccctcgacc                                                                                                                                                                                                                                     >  2:517446‑M1/234‑235 (MQ=255)                  aTGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCAc                                                                                                                                                                                                                                   >  1:125366/1‑221 (MQ=255)                   tGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  1:978051/218‑1 (MQ=255)                      cttgagcgggcgaaagatctactccaccggcagccacggcctgacctggtacctggtgtagggccgcagcgacgacaacgacccgttggtcggcggcttccttgtgcactgcgacacgcctggcatcacgatcatcgatgactgggaccacttgggcatgcgcgccacttgcagccacgaagtgcgcttcgacgatgtgctgattcccctcgacc                                                                                                                                                                                                                                     <  2:888460‑M1/2‑1 (MQ=255)                       gTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACg                                                                                                                                                                                                                                  <  2:1021504/217‑1 (MQ=255)                          ggCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGt                                                                                                                                                                                                             >  1:896962/1‑235 (MQ=255)                              cTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAacac                                                                                                                                                                                                        >  1:575806/1‑236 (MQ=255)                              cTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAaca                                                                                                                                                                                                         <  1:518229/235‑1 (MQ=255)                                         cTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAaca                                                                                                                                                                                                         <  1:809903/224‑1 (MQ=255)                                             aGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  2:438706/192‑1 (MQ=255)                                              gCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAg                                                                                                                                                                                         >  1:925481/1‑235 (MQ=255)                                              gCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGGATAcggccg                                                                                                                                                                                                                  >  1:245541/1‑210 (MQ=255)                                                   ccGGCAGGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAaca                                                                                                                                                                                                         <  2:1125954/214‑1 (MQ=255)                                                          gCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTaa                                                                                                                                                                                                           >  2:831272/1‑205 (MQ=255)                                                                        tgCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTACCACCGCCATCCACGGTCGGCTCTCGCCgg                                                                                                                                                                              >  2:742109/1‑219 (MQ=255)                                                                          cccGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  1:351795/163‑1 (MQ=255)                                                                           ccGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGcc                                                                                                                                                                                                                                >  2:953427/1‑167 (MQ=255)                                                                             ggcggcggcACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCa                                                                                                                                                          >  1:839476/1‑235 (MQ=255)                                                                              gcggcggcACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  2:557571/159‑1 (MQ=255)                                                                                  cggcACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATAcggccgg                                                                                                                                                                                                                 >  2:461947/1‑175 (MQ=255)                                                                                     cACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCgg                                                                                                                                                              >  1:1060152/1‑223 (MQ=255)                                                                                     cACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCggg                                                                                                                                                  >  1:640243/1‑235 (MQ=255)                                                                                        ggTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGGGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  2:1115796/148‑1 (MQ=255)                                                                                                acaacgacccgttggtcggcggcttccttgtgcactgcgacacgcctggcatcacgatcatcgatgactgggaccacttgggcatgcgcgccacttgcagccacgaagtgcgcttcgacgatgtgctgattcccctcgaCCACGCcgtc                                                                                                                                                                                                                             <  2:544819‑M1/10‑1 (MQ=255)                                                                                                     gacccgttggtcggcggcttccttgtgcactgcgacacgcctggcatcacgatcatcgatgactgggaccacttgggcatgcgcgccacttgcagccacgaagtgcgcttcgacgatgtgctgattcccctcgaCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGt                                                                                                                                 >  1:303430‑M1/135‑236 (MQ=255)                                                                                                        gtgggCGAACAGCAGGGGGTCGGTGCGGCCCAGTACATGCTGGAAGCGGGGCAGGCTGGCCAGCGGCGCTCCGAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  2:101434/130‑1 (MQ=255)                                                                                                               aaCGGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGTCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAg                                                                                                                          <  1:698817/233‑1 (MQ=255)                                                                                                                            cGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGc                                                                                                                                                           >  2:837108/1‑187 (MQ=255)                                                                                                                                      cAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGCGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATAcggccgg                                                                                                                                                                                                                 >  2:31995/1‑123 (MQ=255)                                                                                                                                            aTGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAgcg                                                                                                  >  1:981061/1‑228 (MQ=255)                                                                                                                                                 ggAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     <  1:858630/92‑1 (MQ=255)                                                                                                                                                 ggAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGcc                                                                                                                                                                                                                                     >  2:858629/1‑92 (MQ=255)                                                                                                                                                 ggAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCCGTAACACCGCCATCCACAGTAGGCCCTCGCCGTCTAGTTCGGcc                                                                                                                                                                   >  2:351673/1‑158 (MQ=255)                                                                                                                                                 ggAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGGCGCTGACGGCGTGGTCGAGGGGCATCAGCACAt                                                                                                            >  2:443069/1‑213 (MQ=255)                                                                                                                                                 ggAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGAATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCAGCCTGCGGGGCACTGGCggg                                                                                                                                                  >  2:584013/1‑175 (MQ=255)                                                                                                                                                    aGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAggg                                                                                                                        >  1:459367/1‑198 (MQ=255)                                                                                                                                                      cGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCggg                                                                                                                                                  >  2:431357/1‑170 (MQ=255)                                                                                                                                                        tGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTgg                                                                              <  1:837109/236‑1 (MQ=255)                                                                                                                                                            aGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGgcgc                                                                           >  1:1002089/1‑235 (MQ=255)                                                                                                                                                              gCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACt                                                                                              <  1:52170/214‑1 (MQ=255)                                                                                                                                                                         gcgcTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAgggg                                                                                                                       <  1:795781/178‑1 (MQ=255)                                                                                                                                                                          cgcTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCATTAACACCGCCATCCACAGt                                                                                                                                                                                           <  2:570053/109‑1 (MQ=255)                                                                                                                                                                          cgcTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACt                                                                                              <  2:839475/202‑1 (MQ=255)                                                                                                                                                                               ccAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGgc                                                                             >  1:995261/1‑214 (MQ=255)                                                                                                                                                                               ccAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGgc                                                                             <  2:995260/214‑1 (MQ=255)                                                                                                                                                                                cAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGgcgc                                                                           <  2:797219/215‑1 (MQ=255)                                                                                                                                                                                         gccacttgcagccacgaagtgcgcttcgacgatgtgctgattcccctcgaCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGCCTAGTTCGGCCTGCGGGGCACTGGCGGGgctga                                                                                                                                             <  1:836946‑M1/90‑1 (MQ=255)                                                                                                                                                                                                cgcTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGgct                                                                                                                                               >  1:260878/1‑131 (MQ=255)                                                                                                                                                                                                 gctgctTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGctgacgctgacg                                                                                                                                     <  2:1033343/140‑1 (MQ=255)                                                                                                                                                                                                    gctTGAGAAAGCCCGCCAGCCAGGCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCTGGGCTGACGCTGACGGCGTGGTCGAgggg                                                                                                                       <  2:600046/151‑1 (MQ=255)                                                                                                                                                                                                     ctTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCg                                                                                                                            <  2:606263/145‑1 (MQ=255)                                                                                                                                                                                                        gagaAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATc                                                  >  2:978024/1‑216 (MQ=255)                                                                                                                                                                                                         agaAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGACTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGGCAg                                 >  1:408961/1‑232 (MQ=255)                                                                                                                                                                                                            aaGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCgtg                            <  1:1130804/234‑1 (MQ=255)                                                                                                                                                                                                              gCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCgtgt                           <  2:1002088/233‑1 (MQ=255)                                                                                                                                                                                                               cccGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAg                                                                <  2:925480/195‑1 (MQ=255)                                                                                                                                                                                                                  gccagccaGTCGCGCGCGGCGCGGGCCACGCcgtc                                                                                                                                                                                                                             >  1:1048416/1‑35 (MQ=255)                                                                                                                                                                                                                  gccagccaGTCGCGCGCGGCGCGGGCCACGCcgtc                                                                                                                                                                                                                             <  2:1048415/35‑1 (MQ=255)                                                                                                                                                                                                                  gccagccaGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCgatgat                                            >  2:485615/1‑212 (MQ=255)                                                                                                                                                                                                                  gccagccaGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCGTGTCGCAGt                     >  1:920095/1‑235 (MQ=255)                                                                                                                                                                                                                  gccagccaGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGGCATCGATGATCGt                                         >  1:442034/1‑215 (MQ=255)                                                                                                                                                                                                                   ccagccggTCGCGCGCGGGGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCgg                                                                                                                                                              <  2:2030/97‑1 (MQ=255)                                                                                                                                                                                                                      cgatgtgctgattcccctcgaCCACGCCGTCGTATACGGCCGGCAGTAACACCg                                                                                                                                                                                                      <  2:845619‑M1/33‑1 (MQ=255)                                                                                                                                                                                                                             gggcgcggcccgGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACAt                                                                                                            <  2:1026132/135‑1 (MQ=255)                                                                                                                                                                                                                             gcgcgcgGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCGTGTc                          <  1:742110/219‑1 (MQ=255)                                                                                                                                                                                                                              cgcgcgGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGgcgc                                                                           <  1:410487/169‑1 (MQ=255)                                                                                                                                                                                                                                 gcggcgcggGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCAGCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCAt                                                                       <  2:1024591/170‑1 (MQ=255)                                                                                                                                                                                                                                  cggcgcggGCCACGCCGTCGTATACGGCCGGCAGTAACGCCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCg                                                                                                                            <  2:292556/116‑1 (MQ=255)                                                                                                                                                                                                                                   ggcgcggGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGccc                                                                   <  2:1075401/172‑1 (MQ=255)                                                                                                                                                                                                                                   ggcgcggGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTgg                                                             <  2:955474/178‑1 (MQ=255)                                                                                                                                                                                                                                    gcgcggGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCGTGTCGCAGTGCACAAGGAAGCCGCCGAc  >  1:443563/1‑236 (MQ=255)                                                                                                                                                                                                                                     cgcggGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGctgacgctgacg                                                                                                                                     >  2:775836/1‑104 (MQ=255)                                                                                                                                                                                                                                         gaCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAgg                                <  2:745457‑M1/199‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                     CCAGTTCCACGGCCTGGATGGCGTTGGCGCTGACCAGATGCTTGAGCTGCCCGGCATGCTGGGGTGAGATGTGCCCGGCGGCGGCACCGTCGAGCAGGCTCTGGTTGGCGAACAGCAGGGTGTCGATGCGGCCCAGTACATGCTGGAAGCGTGGCAGGCTGGCCAGCGGCGCTCCCAGGTTGGAAGGTGTGCGCTGCTTGAGAAAGCCCGCCAGCCAGTCGCGCGCGGCGCGGGCCACGCCGTCGTATACGGCCGGCAGTAACACCGCCATCCACAGTAGGCTCTCGCCGTCTAGTTCGGCCTGCGGGGCACTGGCGGGGCTGACGCTGACGGCGTGGTCGAGGGGAATCAGCACATCGTCGAAGCGCACTTCGTGGCTGCAAGTGGCGCGCATGCCCAAGTGGTCCCAGTCATCGATGATCGTGATGCCAGGCGTGTCGCAGTGCACAAGGAAGCCGCCGAC  >  AE015451/3661843‑3662305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.