New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4571500	54 (0.870)	5 (0.080)	5/332	NT	8.5%	coding (1364/2775 nt)	treY	maltooligosyl trehalose synthase
	?	AE015451	= 4571540	56 (0.940)					coding (1404/2775 nt)	treY	maltooligosyl trehalose synthase

AGCATGATCCGGCCGGCGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGC  >  AE015451/4571281‑4571730                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       agcaTGATCCGGCCGGCGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTAc                                                                                                                                                                                                                        >  1:423016/1‑236 (MQ=255)     tGATCCGGCCGGCGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTAcc                                                                                                                                                                                                                       <  2:1122358/233‑1 (MQ=255)          cggccggcGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGttt                                                                                                                                                                                                                 >  1:468996/1‑234 (MQ=255)              cggcGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCATCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGaa                                                                                                                                                                                                           >  1:511588/1‑236 (MQ=255)               ggcGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAAc                                                                                                                                                                                                          >  1:747733/1‑236 (MQ=255)                      cgccgcTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCg                                                                                                                                                                                                             <  2:747732/226‑1 (MQ=255)                                   aCTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGgc                                                                                                                                                                                      <  1:437151/236‑1 (MQ=255)                                   aCTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGgc                                                                                                                                                                                      <  1:950642/236‑1 (MQ=255)                                      gtgGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATgcct                                                                                                                                                                                            <  1:100480‑M2/227‑5 (MQ=255)                                                  cAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGAc                                                                                                                                                                        >  1:1116617/1‑235 (MQ=255)                                                  cAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGAc                                                                                                                                                                        >  1:1056646/1‑235 (MQ=255)                                                                  tgcccTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGgc                                                                                                                                                                                      <  1:237761/203‑1 (MQ=255)                                                                    cccGGAAGAAGGGCGCCGGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATgcctgcgggcgcccggcgaatcgcgcccagggtcagg                                                                                                                                                           >  1:257370‑M2/1‑193 (MQ=255)                                                                         aagaagTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAgg                                                                                                                                                                          <  2:683603/210‑1 (MQ=255)                                                                             agTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCa                                                                                                                                            <  1:299903/236‑1 (MQ=255)                                                                               tGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCaa                                                                                                                                           <  1:798440/235‑1 (MQ=255)                                                                                 cgcCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCa                                                                                                                                            >  1:996882/1‑232 (MQ=255)                                                                                 cgcCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCa                                                                                                                                            <  2:996881/232‑1 (MQ=255)                                                                                  gcCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGCCCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGtt                                                                                                                                                                                                                                     >  2:47285/1‑142 (MQ=255)                                                                                   ccAGGCCCGTCACCTGGTGCTCACCGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTcc                                                                                                                                                           <  1:663551/215‑1 (MQ=255)                                                                                    cAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCcagcag                                                                                                                                                      <  2:468995/219‑1 (MQ=255)                                                                                    cAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCCGCGGGCGCCCGGCGCAGGACGaaa                                                                                                                                                                    >  1:863553/1‑205 (MQ=255)                                                                                               ccTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCcagcag                                                                                                                                                      <  2:1116616/208‑1 (MQ=255)                                                                                                 tGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGgc                                                                                                                                                                                      <  1:951371/174‑1 (MQ=255)                                                                                                   gTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCg                                                                                                                       >  1:980627/1‑235 (MQ=255)                                                                                                    tGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCa                                                                                                                                                                            >  1:870431/1‑181 (MQ=255)                                                                                                    tGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCg                                                                                                                       <  1:666097/234‑1 (MQ=255)                                                                                                            gCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGt                                                                                                                                                                 <  1:1039614/184‑1 (MQ=255)                                                                                                              cAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGgc                                                                                                                                                                                      <  2:377539/161‑1 (MQ=255)                                                                                                                 ccTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCattgaagtaggttcggtaaaccgggtaatgcgccaccaacgc                                                                                                                                                                                              <  1:1094176‑M1/150‑43 (MQ=255)                                                                                                                 ccTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCattgaagtaggttcggtaaaccgggtaatgcgccaccaacgc                                                                                                                                                                                              >  2:1094175‑M1/1‑108 (MQ=255)                                                                                                                 ccTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCg                                                                                                         <  2:353046/235‑1 (MQ=255)                                                                                                                    ggCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAg                                                                                                                    >  2:174829/1‑221 (MQ=255)                                                                                                                       cGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTgg                                                                                                  <  1:177480/236‑1 (MQ=255)                                                                                                                        ggTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGgc                                                                                                                                                                               >  2:1039613/1‑158 (MQ=255)                                                                                                                            accgcgaGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGCCCTGATGACCCGTGACCTGCCCCTGGGCGCGATGCGCAGGGC‑CTTGCAGGCattgaagtaggttcggtaagccgggtaatgcgccaccaacgcctgcaaggcccggcgaatcgcgcccag                                                                                                                                                                   <  1:782284‑M1/163‑70 (MQ=255)                                                                                                                                    tCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCaa                                                                                                                                 <  1:694910/192‑1 (MQ=255)                                                                                                                                           cccAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTTCGGGCGCCCGGCGCAGGACGAACCGTTCTTCCCGCCGGccc                                                                                                                                                  >  2:256524/1‑168 (MQ=255)                                                                                                                                                       tGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCaa                                                                     >  2:964442/1‑233 (MQ=255)                                                                                                                                                         cAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgggcg                                                                          >  1:608673/1‑226 (MQ=255)                                                                                                                                                           ggTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGc                                                                                                                   <  2:423015/183‑1 (MQ=255)                                                                                                                                                           ggTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCCGCGGGCGCCCGGCGCAGGACGAAAc                                                                                                                                                                   >  2:443130/1‑135 (MQ=255)                                                                                                                                                              ggCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTggcgg                                                            >  1:990836/1‑235 (MQ=255)                                                                                                                                                               gcgcgcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTggcggc                                                           <  1:404956/235‑1 (MQ=255)                                                                                                                                                               gcgcgcAACGACCTGAGGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCa                                                                                              <  2:412570/200‑1 (MQ=255)                                                                                                                                                                 gcgcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACg                                                                                     >  1:364022/1‑207 (MQ=255)                                                                                                                                                                 gcgcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAACCCTggcggc                                                           >  2:494519/1‑233 (MQ=255)                                                                                                                                                                   gcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCACTGCCTGCGGGCGCCCGGCGCAGGACGCAACGTTCTTCCAGCAGGCCCTGCCCAATGCCCGGCAAGAcc                                                                                                                             >  2:82185/1‑165 (MQ=255)                                                                                                                                                                   gcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCt                                                                                                                  >  2:435082/1‑176 (MQ=255)                                                                                                                                                                   gcAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTg                                                                                                   >  2:877200/1‑191 (MQ=255)                                                                                                                                                                           cTGATGCCCCGTGACCTGACCCTGGGCGCGGTTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACt                                                                                                              <  2:51725/172‑1 (MQ=255)                                                                                                                                                                               tggcccGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCgttca                                            <  1:724885/231‑5 (MQ=255)                                                                                                                                                                               tgcCCCGCGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATgcctgcgggcgcccggcgaatcgcgcccagggtcaggt                                                                                                                                                          >  2:1134589‑M2/1‑86 (MQ=255)                                                                                                                                                                                 aCCCGTGACCGGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACt                                                                                                    <  2:212820/176‑1 (MQ=255)                                                                                                                                                                                        acctgaccCTGGGCGCGATTCGCCGGGCGCCCGCAGGCattgaagtaggttcggtaaaccgggtaatgcgccaccaacgcctgcaaggcccggcgaatcgcgcccagggtcaggtcgcggggca                                                                                                                                                  >  2:1134589‑M1/1‑38 (MQ=255)                                                                                                                                                                                         cctgaccCTGGGCGCGATTCGCCGGGCGCCCGCAGGCattgaagtaggttcggtaaaccgggtaatgcgccaccaacgcctgcaaggcccggcgaatcgcgcccagggtcaggtcacgggtcatcaggtcgttgcgcgccacctgcaacagtgcctgggccaccgactcgcagtcaccggccaggctggcgttgagcaccaggtgacgggcccggcgcccttcttccggg                                       >  1:257370‑M1/1‑37 (MQ=255)                                                                                                                                                                                                cTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGCTTACCGAACCTACTTCAATgcctgcaaggccctgcgcatcgcgcccaggggcaggtcacgggtcatcagggcgttgcgcgccacctgcaacagtgcctgggccaccgactcgcggt                                                                                               <  1:782284‑M2/166‑98 (MQ=255)                                                                                                                                                                                                 tGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTgg                                                                             >  1:4622/1‑183 (MQ=255)                                                                                                                                                                                                     cgcgATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCaa                                                                                                                                 <  1:463271/127‑1 (MQ=255)                                                                                                                                                                                                     cgcgATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCaa                                                                                                                                 >  2:463270/1‑127 (MQ=255)                                                                                                                                                                                                      gcgATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGc                   >  1:788063/1‑236 (MQ=255)                                                                                                                                                                                                       cgATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTgg                                                                                                  >  2:1077592/1‑156 (MQ=255)                                                                                                                                                                                                       cgATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTgg                                                                                                  <  1:1077593/156‑1 (MQ=255)                                                                                                                                                                                                                        gCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGc  <  1:660569/236‑1 (MQ=255)                                                                                                                                                                                                                          aGGCattgaagtaggttcggtaaaccgggtaatgcgccaccaacgcctgcaaggcccggcgaatcgcgcccagggtcaggtcacgggtcatcaggtcgttgcgcgccacctgcaacagtgcctgggccaccgactcgcagtcaccggccaggctggcgttgagcaccaggtgacgggcctggcgcacttcttcagggaagtccgggcgctcgctgacgttgctccac         <  1:100480‑M1/227‑224 (MQ=255)                                                                                                                                                                                                                            gCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATgcctgcaaggcccggcgaatcgcgcccagggtcaggtcacgggtcatcaggtcgttgcgcgccacctgcaacagtgcctgggccaccgactcgcagtcaccggccagg                                                                                    >  2:1094175‑M2/1‑42 (MQ=255)                                                                                                                                                                                                                            gCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATgcctgcaaggcccggcgaatcgcgcccagggtcaggtcacgggtcatcaggtcgttgcgcgccacctgcaacagtgcctgggccaccgactcgcagtcaccggccagg                                                                                    <  1:1094176‑M2/150‑109 (MQ=255)                                                                                                                                                                                                                             |                                                                                                                                                                                                                                       AGCATGATCCGGCCGGCGAAGCGCCGCTGAGCGAACTGTGGAGCAACGTCAGCGAGCGCCCGGACTTCCCTGAAGAAGTGCGCCAGGCCCGTCACCTGGTGCTCAACGCCAGCCTGGCCGGTGACTGCGAGTCGGTGGCCCAGGCACTGTTGCAGGTGGCGCGCAACGACCTGATGACCCGTGACCTGACCCTGGGCGCGATTCGCCGGGC‑CTTGCAGGCGTTGGTGGCGCATTACCCGGTTTACCGAACCTACTTCAATGCCTGCGGGCGCCCGGCGCAGGACGAAACGTTCTTCCAGCAGGCCCTGACCAATGCCCGGCAAGACCTTGCCGAAGCTGACTGGCCGCTACTGGACCAACTTGAACGGTGGCTGGGCGGGCAAGCCTGGCGGCATCTGCCACCGGGGCGCGCCCGCAAGCAACTGCGCCACGCCTGCGTGCGCTTCCAGC  >  AE015451/4571281‑4571730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.